Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5584 ATGGAAATGGAATTAATATACAAAGAAACCATGAAACCAAGTTCAGGCACTCCTCCACACCTCAAAACTTACCCTCTCTCCTTCTTGGATGTGACCACTCCTCCCCAATACATGCCGATGATTTACTTTTACCATCCAAAACAAATTGAAAATCAAGAATCCAAGTTAGCCCTCCTCAAGAAATCCTTACCCGAAGCTCTCTCAATGTACTACCCAATTGCAGGCAGGTTCAAAGGTAGACTCGCCATTGACTGCAACGACCAAGGAGTGCCATTGCTCGTCACAAAACTCAAATGCCATCTCTCTCACTTTCTCAACAACCCAATCCAGCCTAATCTGCTTCCTCTGTTTCCAGACAATTTGGCCTGGACAAATATGAACAATCCAGACCACGATCCCATCATGGCCATTCAAATCAACTGCTTCCATTGCGGAGGAATTGCAATRGCAGTCTGCGTCTCTCACAAGCTCGGCGACATTTCCACTCTCATCAACTTCGTCAACGACTGGGCCGCCATCACCAACCACTACCAACATCAGAACCACKCACTACCCTCTCCGCCCTTACTGGACGCCGGAGTGTCTGTTTTTCCTCAAGGAGACCTGCCGGTTTACCAAGAAAAACCCTACTTCGGTCTCCCGAAATCGGTCTGCAAGAGGTTCGTGTTCGAAGCTTCGAAGATCGAAGCCCTTAAAGCCACGGCTGCACCGATTCWTCCGACAAGGTTTGAAGCGGTGGCAGCACTGATTTGCAAGTGTGCGGCTTCTGCACTGGGGTTAAGCCCTAACTCGCCGTTGTTAAGCACCGTTACGGTGAATCTCCGCAAGAGGATCGATCCTCCTGTRCCCAGCAAAACCTTAGGGAACATGATAACGTTCTTCRTGTTTTGCGCCTCTCAGACGGATCAGCTACCGGAGTTGGTAAGCAAGATGAAACAGGGGATGGTTGGTAGTGAGATGCAGTTGAAGAAGTATGGAGGAAAGTACAGGGACTTGGATTTCATCGGCGAGARACTCAAACGAGACTCGGAGGCTCCCAGGGATTTGAAGTTRGCATTGATGACACTTTCRACGTCCGTTTCGAATTTCAAGAACGGTGTGGTTTTTATGGATGCGAGAGATGGGAAAGGGATGGAAGTGCTTGTGAACATGGAAGAGCAGCACATGGCAAGGCTCGAGTGTAACCAAGACCTGCTTCAATATGCTTCTGTTGAACCTTCCGAGARTTTCCGGTTTACCCGGAACCACCGTACCCTGAGATCCATAACTCGGTGTGCAAGAGGTTTGTGTTCCAAGGTTCCAAGATCGATTCCCTGA 1317 0.4829 MEMELIYKETMKPSSGTPPHLKTYPLSFLDVTTPPQYMPMIYFYHPKQIENQESKLALLKKSLPEALSMYYPIAGRFKGRLAIDCNDQGVPLLVTKLKCHLSHFLNNPIQPNLLPLFPDNLAWTNMNNPDHDPIMAIQINCFHCGGIAXAVCVSHKLGDISTLINFVNDWAAITNHYQHQNHXLPSPPLLDAGVSVFPQGDLPVYQEKPYFGLPKSVCKRFVFEASKIEALKATAAPIXPTRFEAVAALICKCAASALGLSPNSPLLSTVTVNLRKRIDPPVPSKTLGNMITFFXFCASQTDQLPELVSKMKQGMVGSEMQLKKYGGKYRDLDFIGEXLKRDSEAPRDLKLALMTLSTSVSNFKNGVVFMDARDGKGMEVLVNMEEQHMARLECNQDLLQYASVEPSEXFRFTRNHRTLRSITRCARGLCSKVPRSIP* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5584 438 Gene3D - 350 402 IPR023213 -
Amo13g5584 438 Gene3D - 1 203 IPR023213 -
Amo13g5584 438 Gene3D - 207 321 IPR023213 -
Amo13g5584 438 PANTHER F21J9.9 5 407 - -
Amo13g5584 438 Pfam Transferase family 2 294 - -
Amo13g5584 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5584 Amo-Chr13 157568558 157601547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5584 1 310 Monolignol Biosynthesis Gene Families AT5G48930 24.478 3.46e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5584 - - adu:107481923 799.66