Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5580 ATGTTGTCTTGCTTTACCTCTATGGATTTATTTTCTCTCTTCCTGAGTATAATACTTCTTATGCTGACTCCACTTTCTGTTTCACAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGAAAAGTAACTACACTGATGGAAGCACAGGGTTGTCATGGATTTCAGACTCTGACATGATGCACCATGGAACTCCAGTGGAAGTAGAAGATGCTCCAAATGGAGGAACCATGGTTCAGTATCGAACGCGCCGAGAGTTTCCCATTGACAGCAAGAAACATTGTTACACACTAAGCACAGTTGAGAGAAGAAGGTATCTTGTTAGAGCAACATTTCAATATGGAATGCTGAAAAGTGGAGGCACATACCCTCAGTTTCAGCTCTATTTGGATGCAACAAAATGGGCCACTATCTCTATATATGATGCTAAAAGAGTGTATATTGAAGAAATGATTATAAGGGCACCCACAAATTCCATTGATGTTTGCATGTGTTGTGCCACAACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGACCCTTGAATCTTTCTATGTATGCCACTGATTATGAGGATAAATACTACTTGAAAGTAGCTGCAAGAATCAATTTTGGTGCTCCAAGTGAGGCATCTCTCAGGTACCCGGATGATCCATATGATAGAATTTGGGATTCTGATCTTGCTAGAAGGCAAAATTTTCTTGTAGGGGTGGCACCCGGAACAGAGAGAATTAGTACTACAAGGAACATAGATATAGGGACAAGAGAGTATCCYCCTGTTAGAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGAGTACTTAGCTATAGATTGAATTTAGAGGATTTCCCTGCCAATGCTCGCGCATACGCGTATTTCGCAGAYATTGAAGATCTTYGTAAYAATGAGGTTCGAAAATTCAAGTTGAAGCAGCCTTATATACCTGACTATAGCAATGCAGTTGTTAACATTGCTGAGAATGTCAATGGTAGCTACATTCTTTATGAACCAAGTTACATGAATGTGAGTCTGGATTTTGTTCTGTCATTCAACTTTGTTGCAACCCCGGATTCTACTCGAGGACCTCTCCTTAATGCAATGGAAATAAGCAAATATGTACGGATTGCTTCAAAGACTGACAGGCAAGATTCAACTGTTGTAAATGCATTGCGATCGGCGTCTGCTGAAAGTTTGCAAATGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGATAAATTGCAGTGCCACTACACCTCCAAGAATTTCAAAAATAGTTCTATCAAGAAGGAATTTGACAGGTGAAATCCCACCTGAACTGAATAACATGGATGCTTTGACAGAGTTCCATTTAGAAAACAACAAATTGACTGGTCCTCTACCATCTTACCTGGGTAGTTTGCCAAGTTTACAAGCACTGTTCATACAGAATAATTCCTTTAGTGGGGAAATACCAGCAAGATTAATATCTGGAAAATTTGTTTTCAACTATGATGGCAATATTGGACTACATAGAGGGAGCAAGAAGCATTTCAAGTTGATACTTGGAATTTCTATTGGAGTACTAGCAATTCTATTACTATTGTTCATAGCAGGTGTTTCTGCACACAAAAGCACTAAACCTTCAAATGCATATTCATTGGTTCGAGGAAATTTAACGGATGAAGGTACCACTTGCTATATAGCACTCTCAGATTTGAAAGAAGCTACTGATGATTTTTCGAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTATTATGGGAGAATGAAAGATGGAAAAGAGGTTGCAGTTAAGACTATGACTGATTCATCCAGCCATGGGAACCGCCAATTTGTTAATGAGGTAGCCCTCTTATCAAGAATTCATCATAGGAACTTGGTTCCTCTGATTGGATACTGTGAAGAAGAATATCAGCATATTTTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGATCACCTTCATGAACCTTCCAAGCAAAAGAACTTAGATTGGCTAACTCGACTTCGAATTGCAGAAGATGCAGCCAAAGGTCTTGAATACTTGCACACAGGATGCAATCCCAGCATCATTCACCGAGATGTAAAGACCAGCAATATTCTTTTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCTAGGCTAGCCGAAGAAGATTTAACTCACATATCAAGCATTGCAAGGGGAACCATAGGTTACCTTGATCCTGAGTACTATGCAAATCAACAGTTGACAGAAAAGAGTGATGTGTATAGTTTTGGAGTTGTTCTTCTAGAACTGATATCTGGAAGAAAGCCTGTGTTACCAGAAGATTATGGTGATGATATGAATATTGTTCACTGGGCAAGACCTTTAATCCGAAAAGGCGATGTGATGAGGATGATTGACCCTTGTATAGCAGGGAATGCGAAGYTTGAATCCATTTGGAGGGTTGTTGAGATTGCAATGCAATGTGTGCAACAGCATGGTGCATCAAGGCCAAGGATGCAAGAAGTCATTTTGGCTATACAAGATGCTACCAAGATTGAAATAGAAGCACAAAATAAGCTAAAATCAACATCAACATCATCATCATCATCAACTTCAGGAAAACCAGAGTCTTCTAGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGTCCTGACTCCTCAAGTGGCTGTCTCCCATCAGCAAGATAA 2703 0.3944 MLSCFTSMDLFSLFLSIILLMLTPLSVSQLEEFVSIDCGGKSNYTDGSTGLSWISDSDMMHHGTPVEVEDAPNGGTMVQYRTRREFPIDSKKHCYTLSTVERRRYLVRATFQYGMLKSGGTYPQFQLYLDATKWATISIYDAKRVYIEEMIIRAPTNSIDVCMCCATTGSPFISTLELRPLNLSMYATDYEDKYYLKVAARINFGAPSEASLRYPDDPYDRIWDSDLARRQNFLVGVAPGTERISTTRNIDIGTREYPPVRVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFADIEDLXNNEVRKFKLKQPYIPDYSNAVVNIAENVNGSYILYEPSYMNVSLDFVLSFNFVATPDSTRGPLLNAMEISKYVRIASKTDRQDSTVVNALRSASAESLQMNEGDPCVPTPWEWINCSATTPPRISKIVLSRRNLTGEIPPELNNMDALTEFHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGEIPARLISGKFVFNYDGNIGLHRGSKKHFKLILGISIGVLAILLLLFIAGVSAHKSTKPSNAYSLVRGNLTDEGTTCYIALSDLKEATDDFSKKIGKGSFGSVYYGRMKDGKEVAVKTMTDSSSHGNRQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHLHEPSKQKNLDWLTRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTIGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVLPEDYGDDMNIVHWARPLIRKGDVMRMIDPCIAGNAKXESIWRVVEIAMQCVQQHGASRPRMQEVILAIQDATKIEIEAQNKLKSTSTSSSSSTSGKPESSRKTLLTSFLEIESPDSSSGCLPSAR* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5580 900 SUPERFAMILY L domain-like 407 489 - -
Amo13g5580 900 Gene3D Ribonuclease Inhibitor 384 504 IPR032675 -
Amo13g5580 900 Pfam Protein tyrosine and serine/threonine kinase 575 840 IPR001245 GO:0004672|GO:0006468
Amo13g5580 900 CDD STKc_IRAK 579 840 - -
Amo13g5580 900 PANTHER TYROSINE KINASE DOMAIN PROTEIN 19 869 - -
Amo13g5580 900 Gene3D Phosphorylase Kinase; domain 1 536 648 - -
Amo13g5580 900 Gene3D Transferase(Phosphotransferase) domain 1 649 869 - -
Amo13g5580 900 Pfam Malectin-like domain 36 371 IPR024788 -
Amo13g5580 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Amo13g5580 900 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Amo13g5580 900 MobiDBLite consensus disorder prediction 855 900 - -
Amo13g5580 900 ProSiteProfiles Protein kinase domain profile. 573 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5580 900 SUPERFAMILY Protein kinase-like (PK-like) 561 840 IPR011009 -
Amo13g5580 900 PANTHER OS07G0107800 PROTEIN-RELATED 19 869 - -
Amo13g5580 900 SMART serkin_6 573 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5580 Amo-Chr13 157525674 157530287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5580 15 900 Receptor kinase-like Gene Family AT1G67720 65.447 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo13g5580 Malectin_like 1.2e-84 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5580 - - adu:107481991 1709.89