Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5562 ATGTTGTCTTGCTTTACCTCTATGGATTTATTTTCTCTCTTCCTGAGTATAATACTTCTTATGCTGACTCCACTTTCTGTTTCACAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGAAAAGTAACTACACTGATGGAAGCACAGGGTTGTCATGGATTTCAGACTCTGACAAGATGCACCATGGAACTCCAGTGGAAGTAGAAGATGCTCCAAATGGAGGAACCATGGTTCAGTATCGAACGCGCCGAGACTTTCCCATTGACAGCAAGAAACAATGTTACACACTAAGCACAGTTGAGAGAAGAAGGTATCTTGTTAGAGCAACATTTCAATATGGAATGCTGAAAAATGGAGGCACATACCCTCAGTTTCAGCTCTATTTGGATGCAACAAAATGGGCCACTATCTCTATATATGATGCTAAAAGAGTGTATATTGAAGAAATGATTATAAGGGCACCCACAAATTCCATTGATGTTTGCATGTGTTGTGCCACAACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGACCCTTGAATCTTTCTATGTATGCCACTGATTATGAGGATAAATACTACTTGAAAGTAGCTGCAAGAATCAATTTTGGTGCTCCAAGTGAGGCATCTCTCAGGTACCCGGATGATCCATATGATAGAATTTGGGATTCTGATCTTGCTAGAAGGCAAAATTTTCTTGTAGGGGTGGCACCCGGAACAGAGAGAATTAGTACTACAAGGAACATAGATATAGGGACAAGAGAGTATCCACCTGTTAGAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGAGTACTTAGCTATAGATTGAATTTAGAGGATTTCCCTGCCAATGCTCGCGCATACGCGTATTTCGCAGAAATTGAAGATCTTGGTAAAAATGAGGTTCGAAAATTCAAGTTGAAGCAGCCTTATATACCTGACTATAGCAATGCAGTTGTTAACATTGCTGAGAATGTCAATGGTAGCTACATTCTTTATGAACCAAGTTACATGAATGTGAGTCTGGATTTTGTTCTGTCATTCAACTTTGTTGCAACCCCGGATTCTACTCGAGGACCTCTCCTTAATGCAATGGAAATAAGCAAATATGTACGGATTGCTTCAAAGACTGACAGGCAAGATTCAACTGTTGTAAATGCATTGCGATCGGCGTCTGCTGAAAGTTTGCAAATGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGATAAATTGCAGTGCCACTACACCTCCAAGAATTTCAAAAATAGTTCTATCAAGAAGGAATTTGACAGGTGAAATCCCACCTGAACTGAATAACATGGATGCTTTGACAGAGTTCCATTTAGAAAACAACAAATTGACTGGTCCTCTACCATCTTACCTGGGTAGTTTGCCAAGTTTACAAGCACTGTTCATACAGAATAATTCCTTTAGTGGGGAAATACCAGCAAGATTAATATCTGGAAAATTTGTTTTCAACTATGATGGAAATATTGGACTACATAGAGGGAGCAAGAAGCATTTCAAGTTGATACTTGGAATTTCAATTGGAGTACTAGCAATTCTATTACTATTGTTCATAGGTACTTTGTTACTACTGCTGCAGAGAAGGAAATCTCAAACGAGACAAAAAGCAGGTGTTTCTGCACACAAAAGCACTAAACCTTCAACTGCATATTCATTGGTTCGAGGAAATTTAACGGATGAAGGTACCACTTGCTATATAGCACTCTCAGATTTGAAAGAAGCTACTGATGATTTTTCGAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTATTATGGGAGAATGAAAGATGGAAAAGAGGTTGCAGTTAAGACTATGACTGATTCATCCAGCCATGGGAACCGCCAATTTGTTAATGAGGTAGCCCTCTTATCAAGAATTCATCATAGGAACTTGGTTCCTCTGATTGGATACTGTGAAGAAGAATATCAGCATATTTTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGATCACCTTCATGAACCTTCCAAGCAAAAGAACTTAGATTGGCTAACTCGACTTCGAATTGCAGAAGATGCAGCCAAAGGTCTTGAATACTTGCACACAGGATGCAATCCCAGCATCATTCACCGAGATGTAAAGACCAGCAATATTCTTTTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCTAGGCTAGCCGAAGAAGATTTAACTCACATATCAAGCATTGCAAGGGGAACCATAGGTTACCTTGATCCTGAGTACTATGCAAATCAACAGTTGACAGAAAAGAGTGATGTGTATAGTTTTGGAGTTGTTCTTCTAGAACTGATATCTGGAAGAAAGCCTGTGTTACCAGAAGATTATGGTGATGATATGAATATTGTTCACTGGGCAAGACCTTTAATCCGAAAAGGCGATGTGATGAGGATGATTGACCCTTGTATAGCAGGGAATGCGAAGGTTGAATCCATTTGGAGGGTTGTTGAGATTGCAATGCAATGTGTGCAACAGCATGGTGCATCAAGGCCAAGGATGCAAGAAGTCATTTTGGCTATACAAGATGCTACCAAGATTGAAATAGAAGCACAAAATAAGCTAAAATCAACATCATCATCATCAACTTCAGGAAAACCACAGTCTTCTAGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGTCCTGACTCCTCAAGTGGCTGCATCCCATCAGCAAGATAA 2745 0.3949 MLSCFTSMDLFSLFLSIILLMLTPLSVSQLEEFVSIDCGGKSNYTDGSTGLSWISDSDKMHHGTPVEVEDAPNGGTMVQYRTRRDFPIDSKKQCYTLSTVERRRYLVRATFQYGMLKNGGTYPQFQLYLDATKWATISIYDAKRVYIEEMIIRAPTNSIDVCMCCATTGSPFISTLELRPLNLSMYATDYEDKYYLKVAARINFGAPSEASLRYPDDPYDRIWDSDLARRQNFLVGVAPGTERISTTRNIDIGTREYPPVRVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNEVRKFKLKQPYIPDYSNAVVNIAENVNGSYILYEPSYMNVSLDFVLSFNFVATPDSTRGPLLNAMEISKYVRIASKTDRQDSTVVNALRSASAESLQMNEGDPCVPTPWEWINCSATTPPRISKIVLSRRNLTGEIPPELNNMDALTEFHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGEIPARLISGKFVFNYDGNIGLHRGSKKHFKLILGISIGVLAILLLLFIGTLLLLLQRRKSQTRQKAGVSAHKSTKPSTAYSLVRGNLTDEGTTCYIALSDLKEATDDFSKKIGKGSFGSVYYGRMKDGKEVAVKTMTDSSSHGNRQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHLHEPSKQKNLDWLTRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTIGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVLPEDYGDDMNIVHWARPLIRKGDVMRMIDPCIAGNAKVESIWRVVEIAMQCVQQHGASRPRMQEVILAIQDATKIEIEAQNKLKSTSSSSTSGKPQSSRKTLLTSFLEIESPDSSSGCIPSAR* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5562 914 SUPERFAMILY L domain-like 407 489 - -
Amo13g5562 914 Pfam Malectin-like domain 36 371 IPR024788 -
Amo13g5562 914 CDD STKc_IRAK 596 857 - -
Amo13g5562 914 Gene3D Transferase(Phosphotransferase) domain 1 666 884 - -
Amo13g5562 914 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Amo13g5562 914 Pfam Protein tyrosine and serine/threonine kinase 592 857 IPR001245 GO:0004672|GO:0006468
Amo13g5562 914 PANTHER - 20 452 - -
Amo13g5562 914 PANTHER - 441 881 - -
Amo13g5562 914 PANTHER OS07G0107800 PROTEIN-RELATED 20 452 - -
Amo13g5562 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Amo13g5562 914 PANTHER OS07G0107800 PROTEIN-RELATED 441 881 - -
Amo13g5562 914 Gene3D Phosphorylase Kinase; domain 1 552 665 - -
Amo13g5562 914 SMART serkin_6 590 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5562 914 Gene3D Ribonuclease Inhibitor 384 504 IPR032675 -
Amo13g5562 914 SUPERFAMILY Protein kinase-like (PK-like) 578 857 IPR011009 -
Amo13g5562 914 ProSiteProfiles Protein kinase domain profile. 590 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5562 914 MobiDBLite consensus disorder prediction 872 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5562 Amo-Chr13 157224645 157229073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5562 15 914 Receptor kinase-like Gene Family AT1G67720 66.559 0.0 1214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo13g5562 Malectin_like 5.7e-85 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5562 - - adu:107481991 1693.71