Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5559 ATGGAGAGAGAATTAATATCAAGAGAAAGCATCAAACCCTCTAAACCTACACCTTGGCACCACAGAGTCCATCACCTCTCCTTCATAGACCACATCGTTGCACGAAACTACGTCCCGGCAATTTACTTTTACCCGAACAACAACGAAGAAGACGTAACAACCAGAATATCAAGGCTCAAAAAATCGTTATCCAAAGTTCTAACCATATACTACCCTTTTGCAGGTACCTACAGGGACCAGCGATCCATCCATTGCAACGACCGAGGCGTCACATTGCTCGTTTCAAACGTCAAAACCAACCTCTCATATATTCTCAACAACCCCTCCGAATCGCTTCTGAACCCTCTCTTCCCCGATGGCCTTCAGTGGAAGGACATGGGTTCAGATGCCACCATATTAGCCATCCAAATCAACCAATTCTCTTGCGGCGGAATCGCCATTGCCGTCTGCTTGTCTCACAAACTCGGCGACGGTTCCACTCTCTTCAACTTCGTCAATGACTGGGCTACTATCAACCGAACCAATAATCAACTACCTTTCCCGCCGGATCTTGTTGCGGGATCTTCTCTATTCCCGCAAGAGGACTTGCCGGTCTTTCCTGAAATCTCGTTCACGAAGCAAAACACTGTGTGTGCAAGACTCGTGTTCGAGGGTTCCAAGATCGAGTCCCTGAAGGAAACGGTGAAATCCAACGGCGTTGAGAACCCGTCGCGGGTTGAAGTTGTGATTGGAATGATCTACAAGCGCGCCGTTTCTGCTTTGGGGCTTGGCGGCAACGTTAACGCGCCTCTTTTGCTTGTTGCCGCGAATCTCCGAAGGAGAATGGTTCCTCCGCTTCCGGAGAAGTCCATAGGGAACTGGGTCTGGTCGTTCCCCGTAGTGTCAAAGAAAAAGGAGGAAGGTGCAGGGTTGCACGAGTTGGTGGAAGAAACGAGGGAAGGTTTATCTGAGTTGTGCGAGAAGAGTGTGAAGAAGTTTGGGGATAAGGAATTTGTGATTGAGTTCCTAAGGAAGGCTACTACGGCGAGGAGAAGTAGTCCGATTGGATCGGAGAAGAGAGTGTTCTTCTTTGCGAGCTGGTGTAGGGTTCCGACGTATGAGGTGGATTTTGGATGGGGGAAGGCGGCGTGGGTGACGAGTGTTGGGTCTCCGGTCAAGAACAGTGTGGTTTTGATGGATGCCAGAGATGGGAATGGTGTTGAAGCTCTTGTCAGCATGGAGGAGCAAGATTTGGTGGTCTTTCAGCGTGATTTCGAGCTCCTTCAATATGCTTCTATTAATCCAAAGGATGGAAATGGAAGTGATATCAAGAGAAAGCATCAAACCGTGTTCCCCCACTCCGACTCACCTCAGAAACTACCCTCTCTCCTTGTTCGACAATGCCAATCTCCCGACGAAGCCGCCAAAATATCGCTTCTCAAGAAATCCCTATCCCAAGCTCTATGCATATACTACCCTTTTGCCGGCAGGTTCAAAGATCCAACCTCCGTACACTGCAACGATGAAGGCGTCTCCCTTGTGGTCACCAGAATCAAAACCAAGAATCTCTCCAACATTCTCCGCAACCCAACGGACGCCCTCTTGAGCCCCTTGTTCCCCGACGAGCTGCAGTGGAAGGATATGGGCTTGGAGTCGAGCTTGTTGGCAGTTCAAATTAACTGTTTCGCGTGCGGCGGAATGGCCATAACCGTATGCATGTCTCACAAGGTTGGTGACGCTTCCACTTTGTTCAACTTCTTCAACGATTGGTCAACGCTCACCCAACAACCTCACACCACAGTAGCCTTACCCCATGTTGGAGCTTCGCTTTTCCCACAAAGCCACTTCCCACTTCCCCGCCAATATTCCTTCGTCCCTCACCACAACATGGTGTGTAGAAGGCTTGTGTTCGAAGGTTCCAGAATTGATTCCCTTAAGGCCTTGGTTTCGTCGTCGTCGTCTTCTCAGAAGGTGGAGAACCCTACTAGGTTTGAGGTTGTGGTTGCACTGATTTACAAGTGTGCTGTTTCGGCGTTGGGATTGAGTGTTAGCAACACGCTCTTGCGTGTTGCCATCAACTTCCGCAAGAGAATGATTCCTCCGCTGCCGGACAAGTCCTTAGGGAACTTGGTTTCGAGCTTCTATGCTTCCTCCATGGACAATGATGAAGTGGAGTTGCACGAGTTGGTGACCAAAACAAGAGAAGGGCTAGCTTTGTTTTGTGACGAGTTTTCGGCGTATGAAGCGGATTTTGGGTGGGGGAGGCCAGTGTGGGTGACCACTGTTTTGTGTCCTGTGAAGAACAGCGTGGTTTTGATGGATACAAGAGATGGAAAAGGGATTGAAGCGGTTGTGTGCATGCTTGACAAAGACATGGCCATGTTTGAGCGTCACGTTCATCTTCTTCGCTATGCTTCTCTTGAACCAAACCGTTGGACATGCTCATCATGTTCTTGA 2436 0.4943 MERELISRESIKPSKPTPWHHRVHHLSFIDHIVARNYVPAIYFYPNNNEEDVTTRISRLKKSLSKVLTIYYPFAGTYRDQRSIHCNDRGVTLLVSNVKTNLSYILNNPSESLLNPLFPDGLQWKDMGSDATILAIQINQFSCGGIAIAVCLSHKLGDGSTLFNFVNDWATINRTNNQLPFPPDLVAGSSLFPQEDLPVFPEISFTKQNTVCARLVFEGSKIESLKETVKSNGVENPSRVEVVIGMIYKRAVSALGLGGNVNAPLLLVAANLRRRMVPPLPEKSIGNWVWSFPVVSKKKEEGAGLHELVEETREGLSELCEKSVKKFGDKEFVIEFLRKATTARRSSPIGSEKRVFFFASWCRVPTYEVDFGWGKAAWVTSVGSPVKNSVVLMDARDGNGVEALVSMEEQDLVVFQRDFELLQYASINPKDGNGSDIKRKHQTVFPHSDSPQKLPSLLVRQCQSPDEAAKISLLKKSLSQALCIYYPFAGRFKDPTSVHCNDEGVSLVVTRIKTKNLSNILRNPTDALLSPLFPDELQWKDMGLESSLLAVQINCFACGGMAITVCMSHKVGDASTLFNFFNDWSTLTQQPHTTVALPHVGASLFPQSHFPLPRQYSFVPHHNMVCRRLVFEGSRIDSLKALVSSSSSSQKVENPTRFEVVVALIYKCAVSALGLSVSNTLLRVAINFRKRMIPPLPDKSLGNLVSSFYASSMDNDEVELHELVTKTREGLALFCDEFSAYEADFGWGRPVWVTTVLCPVKNSVVLMDTRDGKGIEAVVCMLDKDMAMFERHVHLLRYASLEPNRWTCSSCS* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5559 811 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 463 736 - -
Amo13g5559 811 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 736 803 - -
Amo13g5559 811 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 429 - -
Amo13g5559 811 Gene3D - 620 736 IPR023213 -
Amo13g5559 811 Gene3D - 206 425 IPR023213 -
Amo13g5559 811 Gene3D - 737 797 IPR023213 -
Amo13g5559 811 PANTHER F21J9.9 463 736 - -
Amo13g5559 811 PANTHER F21J9.9 736 803 - -
Amo13g5559 811 PANTHER F21J9.9 5 429 - -
Amo13g5559 811 Pfam Transferase family 465 727 - -
Amo13g5559 811 Pfam Transferase family 4 420 - -
Amo13g5559 811 Pfam Transferase family 737 793 - -
Amo13g5559 811 Gene3D - 2 198 IPR023213 -
Amo13g5559 811 Gene3D - 438 611 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5559 Amo-Chr13 157201408 157207481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5559 472 790 Monolignol Biosynthesis Gene Families AT5G48930 24.804 7.18e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5559 - - gmx:100806928 480.715