Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5527 ATGCTTAAGTCCAAGCCAACAACACTTCTTCTCATAACACTCGCTTCGTTATTCTTATTCCAAAGCTCACTCTCTTCTTTCTCTTTCTTACTCTTCACTCTCTTGCTCTTCGCTCTTTCTCTTAACTACTGGCTTGTCCCCGGAGGTTTTGCATGGAGGAACCACAGAGACCTCTCTGGTCCCATGGGTTGGCCCTTGTTGGGTTCTCTACCTCAAATGGGTTCCCTGGCACACGCAAAACTCGCTTCCATGGCTACAAACTTGAAGGCGAAGAGGCTCATGGCGTTCAGTCTTGGCTCCACACCGGTTATCATAAGCAGTCACCCTGAAACCGCAAGGGAGATTCTCTTCGGTTCTTCATTCTCCGATCGACCAATCAAAACTTCTGCAAAAACCCTAATGTTCGAGCGCGCCATTGGTTTCGCCCCTTCCGGAACCTACTGGCGCCACCTGAGAAGAATCGCCGCTTTCCACATGTTCTCTCCTAAAAATATTCAGAGCTTGGAGAATCTGCGGCATCGCCTGGCTTCTGAGATGGCGGTGAAAGCAATGGGGATGATGGAGGAGAAAGGGTTTGTGGAAGTTCGTAGTGTGTTTCAGGAAGGCTCTCTGAGCAACATTCTGGAGAGTGTGTTTGGTTCTTCTTCTTCGTTGATTAGTGAGGAGTTGGGAGATATGGTGAAAGAAGGGTATGAATTAATCCATATGTTTAACTTGGAAGATTATTTTCCATTGTTGAAGTTTGTTGACTTTTATGGTGTGAAGAGAAGGTGTCACAGATTGGCCAGTCAGGTTAAAAGTGTGGTTGGTAACATTGTGGATCAAAGAAAAAAGTGTCCCCAATCGTTGCTTCGAAACAATCACGATTTTCTTAGCACTTTACTTTCACTGCCTAATAAGGAAGAAAGCTTAGCTGATTCGGATATGGTCGCTATTCTTTGGGAAATGATATTTAGAGGAACAGACACAGTGGCCATATTACTGGAATGGATCATGGCAAGGATGGTACTTCACCAGGACATACAAATGAAAGCCCGCCAAGAGATTGACACGTGTGTTGGCCAAAATGGTCACGTGCAAGATTCCCACATTCCCAACCTCCCTTACCTTCAGGCCATAGTCAAAGAGGTACTCCGCTTGCACCCGCCGGGCCCATTGCTATCATGGGCCCGCCTAGCTGTTCACGATGTCCACGTGGACAAAGTCTTTGTGCCAGCTGGCACAACTGCAATGGTTAACATGTGGGCTATATCGCATGACTCTTCTATATGGGAAGAGCCTTGGGCTTTCAAGCCCGAACGATTCTTGAAGGAAGATATATCCATTATGGGCTCAGACTTGAGGCTAGCGCCGTTTGGTGCAGGGCGTAGGGTGTGCCCGGGGAGAGCGTTGGGCTTAGCCACTGTCCATATCTGGCTTGCACGGCTTCTCCACCATTTCGTCTGGCTTCCCACGGCACAACCCGTGGATCTTTCCGAAAATCTCAGGCTTTCTCTCGAGATGAAGACACCTTTGCGTTGCCGACTAGTTCCTAGACATAACTACGTAAGCCCTTAA 1557 0.4785 MLKSKPTTLLLITLASLFLFQSSLSSFSFLLFTLLLFALSLNYWLVPGGFAWRNHRDLSGPMGWPLLGSLPQMGSLAHAKLASMATNLKAKRLMAFSLGSTPVIISSHPETAREILFGSSFSDRPIKTSAKTLMFERAIGFAPSGTYWRHLRRIAAFHMFSPKNIQSLENLRHRLASEMAVKAMGMMEEKGFVEVRSVFQEGSLSNILESVFGSSSSLISEELGDMVKEGYELIHMFNLEDYFPLLKFVDFYGVKRRCHRLASQVKSVVGNIVDQRKKCPQSLLRNNHDFLSTLLSLPNKEESLADSDMVAILWEMIFRGTDTVAILLEWIMARMVLHQDIQMKARQEIDTCVGQNGHVQDSHIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAISHDSSIWEEPWAFKPERFLKEDISIMGSDLRLAPFGAGRRVCPGRALGLATVHIWLARLLHHFVWLPTAQPVDLSENLRLSLEMKTPLRCRLVPRHNYVSP* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5527 518 PANTHER CYTOCHROME P450 78A7-RELATED 11 513 - -
Amo13g5527 518 SUPERFAMILY Cytochrome P450 60 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 11 513 - -
Amo13g5527 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Amo13g5527 518 Gene3D Cytochrome P450 51 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5527 518 Pfam Cytochrome P450 60 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5527 Amo-Chr13 156754247 156756582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5527 19 513 Cytochrome P450 AT1G13710 51.367 2.20e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5527 - - gmx:100817944 737.643