Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5475 ATGTCTGAGGTTTGGTTATCTCTGAAGAATTCACTTCATTATTGCAAACCTCACTCAACAGAAGTTCATGATCCCATGACAAGTAGAAGGCAGCACCATAGAAAACAAAACGCACGAGACAAAGTCATAGAAGGTTCAAATTCAGAGAAACAACATAGTGGTGGTGATGATGCAATAATCTTTGATCCTGTCACACATGATATTGTCCTTGATGACACGAGCGAGGAAATTAAGATTAAGACTTATCTATCTTATCCTTACACTCACATCAATAATACTCGCGAAGATGGTGGCAACAAAGGGATGGAAGAATCATCAAATAGATCAACAAGAAGAGTTTTGCAACTTCACAGAGAAGATTCATCTTGGAAGATCATAGAAAGAATTTGCCAAACCAAACATATGAACCCTCAAACTACTGAAACCAATGCAGCAGCACATATAGAATGTGTCTTAAAAGTTCTTACCACTCCACAAACACTCGCTTCCTTTGAGGAATGCAGAGAAAGAGTGAGAAACATAGCTGAGAACATGCAACCTCGATGCATAGCTGATGGAAATGAAGTCATGAGGTTTTATGGAACAACCATTGCATGCTCCCTTGGTCTAGTAAATTACTCTTCTATCCTCAGCTGCACTTTAGAACAATGTGGTTTGTGCCAAATTCTGAAGCATGGTTTCAACGCAAACCAAGAATTCCATGGTGAACGTGGGGTTCTCACCACTGCTACAAGTGATCAAGCCTTTGATTCCATTATTTTATTTGAATACAACGAGGAAGCATTACCAATATTGAGGAAGTGTGTTATAGTGTGCAGAGTAATTGCTGGAAGAGTTCACAATCCTTTGCAAGAGATTCAGGAAGAGACTGATTCGGGTTTTGATTCATTGATCAAGAAAATAAGCCGTGACTCATCAGATATTGAAGAACTCTGTATTTTGAATCCTAGAGCTATATTACCTTGCTTTGTGGGGCCAGCAGAATTTGTGATGTTTAGCCATCAATTAGCCATCATCAATATTTTCAAAGTCGGTGCCTTGGCAGTTCCTTTGTTAGGGATGTGGAATCATGTGTTAGCATATGGATTGAGTTGGTGGCTTGATGCTCAGACCAAGAACTGGGCATCCTCTACAAACTGCACTACTCTTGCAGAGTGTGACTGTGCGGTTAAATTTGTTATAGCTACTCCAGTACAAAATGGCCAGAAGGCCAAGAACACTTTGCCATTTACATTCTTCCCTTTTGCTCGTGCTCTGACTCGAATGGCCTCTCCTTCTATGCCCAAACGGCAACAGCAACACTCCAGATTTGATGAAAAGCCTACACCTGCTAGCAAGAGTTCCTTTCATTAA 1353 0.405 MSEVWLSLKNSLHYCKPHSTEVHDPMTSRRQHHRKQNARDKVIEGSNSEKQHSGGDDAIIFDPVTHDIVLDDTSEEIKIKTYLSYPYTHINNTREDGGNKGMEESSNRSTRRVLQLHREDSSWKIIERICQTKHMNPQTTETNAAAHIECVLKVLTTPQTLASFEECRERVRNIAENMQPRCIADGNEVMRFYGTTIACSLGLVNYSSILSCTLEQCGLCQILKHGFNANQEFHGERGVLTTATSDQAFDSIILFEYNEEALPILRKCVIVCRVIAGRVHNPLQEIQEETDSGFDSLIKKISRDSSDIEELCILNPRAILPCFVGPAEFVMFSHQLAIINIFKVGALAVPLLGMWNHVLAYGLSWWLDAQTKNWASSTNCTTLAECDCAVKFVIATPVQNGQKAKNTLPFTFFPFARALTRMASPSMPKRQQQHSRFDEKPTPASKSSFH* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5475 450 Gene3D - 103 328 - -
Amo13g5475 450 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 104 324 - -
Amo13g5475 450 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 77 - -
Amo13g5475 450 MobiDBLite consensus disorder prediction 37 51 - -
Amo13g5475 450 MobiDBLite consensus disorder prediction 17 58 - -
Amo13g5475 450 MobiDBLite consensus disorder prediction 426 450 - -
Amo13g5475 450 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 104 324 - -
Amo13g5475 450 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 77 - -
Amo13g5475 450 MobiDBLite consensus disorder prediction 96 114 - -
Amo13g5475 450 MobiDBLite consensus disorder prediction 93 114 - -
Amo13g5475 450 SUPERFAMILY ADP-ribosylation 113 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5475 Amo-Chr13 155691463 155697418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5475 104 324 C2H2 Transcription Factor Family AT5G54630 44.298 1.94e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5475 - - ahf:112735647 676.396