Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5411 ATGGCGGCAGTCACAGCATCGGTGATTGCTTACAAGCTCTTGGAAGAACCACAACCTTTTTCCCTTGCTGATGTTGCTGCTGCTGCTGTTGCTGCTGATGTTTCTTCTCCGTCTCCTTCTTCTTCTTCTTCTGGTAATTTTGCAGAGACTGGGAATCCATCTGATGCGGTCGTCTTCTTTGGTATCAGTATGGTACTTGGGATTGCATGCAGGCACCTCCTCCGCGGCACCAGAGTCCCTTACACTGTTGCCTTGCTCATCATTGGCATTGCCCTTGGTTCCATAGAGTATGGTACTCATCATCGGCTGGGAAAGATTGGGGATGGAATTCGTATTTGGGCAGAGATTGATCCAGAACTTCTGTTGGCCGTTTTTCTTCCTGCTCTCCTTTTCGAGAGCTCATTCTCAATGGAAGTTCACCAAATCAAGAGGTGTATTGCTCAAATGATYTTACTAGCTGGTCCTGGAGTTGTGATTTCAACCTTTTGTCTTGGAGCTGTTTTGAAGCTAACTTTTCCWTATAATTGGAGTTGGAAAACATCACTATTGCTTGGGGGACTTCTGAGCGCAACTGATCCTGTTGCAGTTGTAGCTTTGTTGAAGGAGCTCGGTGCCAGTAAAAAACTAAGCACAATAATTGAAGGCGAATCCTTGATGAATGATGGGACGGCTATTGTGGTTTATACTTTATTCTATCGGATGGTTCTTGGTAGCACCTACAATTGGGTTGATGTTATCAAATTTCTAGTGCAAGTCTCATTTGGAGCGTAG 771 0.4488 MAAVTASVIAYKLLEEPQPFSLADVAAAAVAADVSSPSPSSSSSGNFAETGNPSDAVVFFGISMVLGIACRHLLRGTRVPYTVALLIIGIALGSIEYGTHHRLGKIGDGIRIWAEIDPELLLAVFLPALLFESSFSMEVHQIKRCIAQMILLAGPGVVISTFCLGAVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGSTYNWVDVIKFLVQVSFGA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5411 256 PANTHER SODIUM/HYDROGEN EXCHANGER 8 45 256 IPR018409 GO:0006814|GO:0006885|GO:0015385|GO:0016021
Amo13g5411 256 Pfam Sodium/hydrogen exchanger family 59 255 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo13g5411 256 PANTHER SODIUM/HYDROGEN EXCHANGER 45 256 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo13g5411 256 Gene3D - 177 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5411 Amo-Chr13 154804270 154807608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5411 35 256 Antiporters AT1G14660 71.300 1.01e-104 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5411 - - ahf:112792471 431.409