Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5391 ATGACATTTTGCAACGGGGAGCATGGTAATAACGATACCATGATACAACATCTCTTGCTTCTTCAAAAATTGCAACCTAACTACTACACGGATCATATTATCAAAGGCCTTATTCAGGATATGTTGCTTGCTGGAACAAACACAACGGTTCCAACTATGGAGTGGACGTTATCCGCTTTGTTGAATCACCCAGAGATACTGAGGAAAGCAAAGGATGAAATTGACAATCACATAGGCAAAGATCGTTTAGTAGATGAATCAGACATTCCAAAACTTCCTTATCTTCAAAATATTATCCATGAGACACTTAGATTGTACTCTCCAAGTCCATTGTTACTGCCTCATTTTTCTTCAGATGAGGTGAATATTGGAGGATTCACTATTCCACGTGACACTATAGTGTTAATTAATTCATGGGCTATGAGAAGAGATCCTAAAATTTGGGGTGATGATGTTGAGTGTTTTAAGCCTGAAAGATTTGAGAAAGAAGGGGAAGCAAACAACTTAATGGCATTTGGATTGGGAAGAAGAGCTTGCCCTGGAGATGGCTTGGCAAATCGTATAATGGGTTTGACTTTGGGATTATTGGTTCAATGTTTTGAATGGGAACGACTCAATCATGAAGAAATTGATATGAGGGAGGACAAAGGTTTCACCTTTGCAAAACTAGTTCCATTAGAGGCTATGTGCAAAGCAAGACCAATCAGCAAGAAATTAGTTAAACATGAAATATGA 735 0.3823 MTFCNGEHGNNDTMIQHLLLLQKLQPNYYTDHIIKGLIQDMLLAGTNTTVPTMEWTLSALLNHPEILRKAKDEIDNHIGKDRLVDESDIPKLPYLQNIIHETLRLYSPSPLLLPHFSSDEVNIGGFTIPRDTIVLINSWAMRRDPKIWGDDVECFKPERFEKEGEANNLMAFGLGRRACPGDGLANRIMGLTLGLLVQCFEWERLNHEEIDMREDKGFTFAKLVPLEAMCKARPISKKLVKHEI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5391 244 PRINTS P450 superfamily signature 44 61 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS P450 superfamily signature 97 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS P450 superfamily signature 170 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS P450 superfamily signature 179 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 237 - -
Amo13g5391 244 SUPERFAMILY Cytochrome P450 7 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 237 - -
Amo13g5391 244 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 172 181 IPR017972 GO:0005506|GO:0016705
Amo13g5391 244 PRINTS E-class P450 group I signature 96 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS E-class P450 group I signature 179 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS E-class P450 group I signature 33 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS E-class P450 group I signature 137 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS E-class P450 group I signature 53 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 PRINTS E-class P450 group I signature 169 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 Pfam Cytochrome P450 12 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5391 244 Gene3D Cytochrome P450 4 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5391 Amo-Chr13 154258280 154259294 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5391 6 240 Cytochrome P450 AT4G37340 60.169 3.73e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5391 K13260 - gmx:100784120 345.125