Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5387 ATGGAACCTTTTTTGTATTACTCCCTTTTCACAATTATTGTTGCCTTCATCATTATCATCACTCTCACCAAGACAAACACAAGCCACAGTAATAAGAAGAACCTTCCACCATGTCCACCAACACTTCCCATAATAGGCAACCTACACCACTTGAAGCCCCGTCTCCACCGAACTTTTCACGCTCTTTCCCAAACCTACRGCCACATTTTCTCTCTCTGGTTCGGCTCTCGCCTTGTCGTCGTTGTGTCCTGTCCAACCCTAGCCCAACAATGCCTCACCAAATACGACACCGTTTTGGCAAACCGCCCTCGTTTTCTCACCGGAAAGTACCTCTTTTATAACCATACCAGCYTGGTGTTCTCTTCCAACAACGACCACTGGCGCAACCTTCGTCGTATAGCCACCATGGACGTCCTCTCGACGCCCCGTCTCAACTCCTTCTTCGAAAYTCGAAGGGACGAGGTCACCAGGTTCATAAGAAACCTGGTGGCAGACACGTCCATGGGGTTCGCTAGGGTGCAACTGAGGCCCAGGATAACGGAGATGTCACTCAATAATATGATGAGGATGGTCTCCGGAAAGAGGAATGAATATGGAAAAGACGACTGCAACGCCAGGGATGACAACGGAGCAGGACGGTTCAGAGAGATCATCAGAGAGATCCTGTCGTTGGTGGATGCGAACAAGAGCGACTTCTTGCCTTTGCTTAGGTGGTTTGATTTTGATGGATTTGTGAAGAGATTGAAGAGGGTTGGTGAAGAAGCTGACATGTTTTGGCAAGGACTCCTTGAAGAACATCGCAATGGGGAGCATGGTAATAACGATACCATGATACAACATCTCTTGCTTCTTCAAAAATTGCAACCTGACTACTACACGGATCATATTATCAAAGGCCTTATTCAGGATATGTTGCTTGCTGGAACAAACACAACGGTTCCAACTATGGAGTGGACGTTATCCGCTTTGTTGAATCACCCAGAGATACTGAGGAAAGCAAAGGATGAAATTGACAATCACATAGGCAAAGATCGTTTAGTAGATGAATCAGACATTCCAAAACTTCCTTATCTTCAAAATATTATCCATGAGACACTTAGATTGTACTCTCCAAGTCCATTGTTACTGCCTCATTTTTCTTCAGATGAGGTGAATATTGGAGGATTCACTATTCCACGTGACACTATAGTGTTAATTAATTCATGGGCTATGAGAAGAGATCCTAAAATTTGGGGTGATGATGTTGAGTGTTTTAAGCCTGAAAGATTTGAGAAAGAAGGGGAAGCAAACAACTTAATGGCATTTGGATTGGGAAGAAGAGCTTGCCCTGGAGATGGCTTGGCAAATCGTATAATGGGTTTGACTTTGGGATTATTGGTTCAATGTTTTGAATGGGAACGACTCAATCATGAAGAAATTGATATGAGGGAGGACAAAGGTTTCACCTTTGCAAAACTAGTTCCATTAGAGGCTATGTGCAAAGCAAGACCAATCAGCAAGAAATTAGTTAAACATGAAATATGA 1524 0.437 MEPFLYYSLFTIIVAFIIIITLTKTNTSHSNKKNLPPCPPTLPIIGNLHHLKPRLHRTFHALSQTYXHIFSLWFGSRLVVVVSCPTLAQQCLTKYDTVLANRPRFLTGKYLFYNHTSLVFSSNNDHWRNLRRIATMDVLSTPRLNSFFEXRRDEVTRFIRNLVADTSMGFARVQLRPRITEMSLNNMMRMVSGKRNEYGKDDCNARDDNGAGRFREIIREILSLVDANKSDFLPLLRWFDFDGFVKRLKRVGEEADMFWQGLLEEHRNGEHGNNDTMIQHLLLLQKLQPDYYTDHIIKGLIQDMLLAGTNTTVPTMEWTLSALLNHPEILRKAKDEIDNHIGKDRLVDESDIPKLPYLQNIIHETLRLYSPSPLLLPHFSSDEVNIGGFTIPRDTIVLINSWAMRRDPKIWGDDVECFKPERFEKEGEANNLMAFGLGRRACPGDGLANRIMGLTLGLLVQCFEWERLNHEEIDMREDKGFTFAKLVPLEAMCKARPISKKLVKHEI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5387 507 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 11 500 - -
Amo13g5387 507 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 500 - -
Amo13g5387 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Amo13g5387 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5387 507 Pfam Cytochrome P450 36 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5387 Amo-Chr13 154219138 154221051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5387 11 503 Cytochrome P450 AT4G37340 50.701 6.17e-174 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5387 K13260 - aip:107634031 729.169