Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5370 TCATTCATTCATAAGAATCAAGAAGAACGAACCATGGAGATTATTGCCATGCTTGGTTACTCAGTTCTGTACGTAGCCATATTCTTCATATTCACCCTTCTCATTCAATCTAGAAGCTTCAAGAACCTCCCACCGGGTCCACCCTCTCTTCCCATAATAGGAAACCTCCACCACCTCAAGAAACCCCTCCACCGCCACTTCCGAGGCCTCTCCGAGAAATACGGCGACGTCTTCTCCCTCTGGTTTGGATCCCGTCTCGTCGTCGTCGTTTCCTCCCCAACCGTCGTCCAAGAGTGCTTCACCAAAAACGACGTCGTTTTAGCAAACCGCCCTCGCTTCCTCTCCGGAAAATACATCTTCTACAATTACACCACCGTGGGATCCAGCGAATACGGAGAGCACTGGCGCAACCTCCGCCGCATCACCTCCCTCGACGTCCTCTCCAACCACCGCCTCAACTCGTTCTCCCCGATCCGAAGGGACGAAACCACCAGACTCATCCGGAAACTCTCTGAGGACTCTACCGAGAACTTCGCCAAAGTGGAACTGTCGTCCAAGTTCTACGACATGACGTTTAACAACATCATGAGGATGATTTCTGGGAAGAGGTACTACGGCGAGGACTGTGATATGGCGGACGTGGAGGAGGCGAAGCAGTTCAGGCAGATGATTTCGGAGGTTCTGCAACTGTCCGGGGCTAACAACAAAACCGATTTCATTCCGCTGCTTGGGATGCTTGACGTTGACAACTTGAAGAAGAGGCTGGTGACCATTAGTGGTAGGACTGATAAGTTCTTGAACGGTCTTCTTCAGGAGCATCGCACCAAGAATCAGCACCAAAACACCATGATTGACCATCTTCTTAGCCTCCAAGACTCCCAGCCTGACTACTATACCGATCAAATCATCAAGGGCCTTGGCTTGGCCATGCTTCTGGCTGGAACGGACTCCTCTGCTGTGACTCTGGAATGGAGTATGTGCAACTTGTTAAACCATCCGGAGGCGTTGAACAGAGTAAGAGAAGAATTGGACACTCACGTTGGTCAAGATCGCATAGTAGACGAATCCGACATTCCAAAATTCACTTACCTTAGAAATGTTATCAACGAGACGCTTCGTTTATACACACCAGCACCCTTGCTGCTACCCCACTCCTCTGCCGAAAAGTGTACTATAGGAGGCTACAAGATCCCAAAAGACACCATAGTCCTCATCAACGGTTGGGCCATTCACCGGGACCCCAAGAACTGGGATGAAGCAACGAGCTTCAAGCCGGAAAGGTTCGAAAGAAAAGGGGAGTTGGAAAAGTTGATTGCGTTTGGGTTGGGGAGAAGGGCGTGCCCTGGTGAAGGGTTGGCTCTTAGGGCAATAAGCTTGACCATTGCTCTTTTGGTTCAGTGTTTTGATTGGAAGTGCGTTGGTGATGAAAAAATTGATATGACTGAGACCGATGGCTTCACTTTAACTAAGAAGGTTCCATTGGTGGCTTTGTGTAAAACACGACCAGTTATCAACCAGCTTATTAAGCCCTAA 1533 0.4938 SFIHKNQEERTMEIIAMLGYSVLYVAIFFIFTLLIQSRSFKNLPPGPPSLPIIGNLHHLKKPLHRHFRGLSEKYGDVFSLWFGSRLVVVVSSPTVVQECFTKNDVVLANRPRFLSGKYIFYNYTTVGSSEYGEHWRNLRRITSLDVLSNHRLNSFSPIRRDETTRLIRKLSEDSTENFAKVELSSKFYDMTFNNIMRMISGKRYYGEDCDMADVEEAKQFRQMISEVLQLSGANNKTDFIPLLGMLDVDNLKKRLVTISGRTDKFLNGLLQEHRTKNQHQNTMIDHLLSLQDSQPDYYTDQIIKGLGLAMLLAGTDSSAVTLEWSMCNLLNHPEALNRVREELDTHVGQDRIVDESDIPKFTYLRNVINETLRLYTPAPLLLPHSSAEKCTIGGYKIPKDTIVLINGWAIHRDPKNWDEATSFKPERFERKGELEKLIAFGLGRRACPGEGLALRAISLTIALLVQCFDWKCVGDEKIDMTETDGFTLTKKVPLVALCKTRPVINQLIKP* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5370 510 PANTHER ISOFLAVONE 2'-HYDROXYLASE 13 507 - -
Amo13g5370 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 507 - -
Amo13g5370 510 Gene3D Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 Pfam Cytochrome P450 44 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Amo13g5370 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5370 510 SUPERFAMILY Cytochrome P450 44 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5370 Amo-Chr13 154047644 154049407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5370 18 507 Cytochrome P450 AT4G37370 52.333 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5370 K13260 - ag:BAA22422 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5370 13 154047644 154049407 Amo13g5370 13 154047644 154049407 ECH