Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5363 ATGGAAGGTTTTCATCATCACCATTCTTCTATCACCTCTCCTTTCTCTTATACCTTTGCCATTACGGGCACCGCAGCAACATCAAGCACCTTCAACACCACACCATGGATGAACAGCAGAATATGGAGCAAGCTTCCTCAGAGGCTCATTGATCGCATCCTCGCCTTCCTCCCTCCTCCTGCTTTTTTTCGAGCTCGTTCTGTGTGCAAGAGATGGTATGCCCTTCTCTTCTCCAACTCTTTTCTCGAATTATACCTTCAAGTCTCACCCAGACGCCACTGGTTCATCTTCTTCAACCACAAGATCAGCAAAAGCTACATCTACAAGAACAACAACAATGGCGCTACTGGCACTGCCTCCAACCACAACAATGACGGTTACCTCTTTGATCCCTATGACATGGCATGGTATCGAATCTCCTTCACTCTCGTCCCATCTGGATTCTCTCCCGCTTCTTCTTCATCTGGATTACTGTGTTGGGTTTCTGATGAAGCTGGTCCCAAAACCATGCTTCTCTGCAACCCTATCATCGGTTCTCTTACTCAGTTACCACCCACACCCAGGCCAAGACTTTTCCCTTCCATTGGCTTAACCGTTACTCCAACCTGCATCGACGTCACAGTAGCTGGCGACGACATGATTTCCCCTTATGCCGTCAAGAACTTAACATCAGAGAGCTTTCACATCGACGGAGGGGGATTCTACTCCATATGGGGAACAACTTCTTCTCTTCCTCGGCTTTGCAGTCTTGAATCTGGAAGAATGGTTTATGCAGAAGGAAAATTCTACTGCATGAATTGCAGCCCCTTTAGTGTTATGGCGTTTGACATAACCTCCAACGCGTGGTTCAAGATCCAAGCTCCCATGAGAAGGTTCTTGCGCTCTCCCAGCTTGCTTGAGTGTAAGGGCAAGCTCCTCCTCATCGCCGCCGTTGAGAAGAGCAAGCTCAACGTCCCCAAAAGCTTGAGGGTTTGGACCTTGCAATCTTGCGGAACAATGTGGGTGGAGAGTGAGAGGATGCCGCAGCAGCTATACACTCAGTTTGCGGAATTGGAGGGTGAGAATGGGTTTGAGTGTGTAGGGCATGGAGAATTCATTGTCATAATCATCCGTGGCACCGACAAAGCATTGTTGTTTGACATTTCTAGGAAGAGGTGGCAATGGATTCCGCCCTGTCCTTATCGTCGTCACCATCATCATGGGTTTGTTGATGAGTTGCATGGTTTTGCATATGAGCCTAGACTTGCTACTCCCATTACTGGACTTCTTGATCACTTAGCACTCCCCTTTCAGAACTTTAATGCTTAA 1308 0.4786 MEGFHHHHSSITSPFSYTFAITGTAATSSTFNTTPWMNSRIWSKLPQRLIDRILAFLPPPAFFRARSVCKRWYALLFSNSFLELYLQVSPRRHWFIFFNHKISKSYIYKNNNNGATGTASNHNNDGYLFDPYDMAWYRISFTLVPSGFSPASSSSGLLCWVSDEAGPKTMLLCNPIIGSLTQLPPTPRPRLFPSIGLTVTPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSIWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVMAFDITSNAWFKIQAPMRRFLRSPSLLECKGKLLLIAAVEKSKLNVPKSLRVWTLQSCGTMWVESERMPQQLYTQFAELEGENGFECVGHGEFIVIIIRGTDKALLFDISRKRWQWIPPCPYRRHHHHGFVDELHGFAYEPRLATPITGLLDHLALPFQNFNA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5363 435 ProSiteProfiles F-box domain profile. 39 88 IPR001810 GO:0005515
Amo13g5363 435 SMART fbox_2 45 85 IPR001810 GO:0005515
Amo13g5363 435 SUPERFAMILY Galactose oxidase, central domain 67 405 IPR011043 -
Amo13g5363 435 Gene3D - 37 83 - -
Amo13g5363 435 SUPERFAMILY F-box domain 35 139 IPR036047 GO:0005515
Amo13g5363 435 Pfam F-box domain 42 78 IPR001810 GO:0005515
Amo13g5363 435 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 42 416 - -
Amo13g5363 435 PANTHER F-BOX/KELCH-REPEAT PROTEIN 42 416 - -
Amo13g5363 435 Gene3D - 98 411 IPR015915 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5363 - - gmx:100805253 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5363 13 153856040 153857426 Amo13g5363 13 153856040 153857426 ECH