Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5342 ATGGCTTCGAGGGTAGAGAGTGATGAAGATGGCGATAACAAAGGTAGTATGTGGGATTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAAGAACATGTACAGAGAAAAAAAATTTTCTGCAGTGCTGCTTCTGCGGCTTGCATTCCAGAGTCTTGGTGTGGTATATGGGGATTTGGGCACTTCGCCCTTGTATGTTTTCTACAACACATTTCCTCATGGAGTGAAAGATCCAGAAGATGTAATCGGAGCTCTTTCCTTGATTATCTACTCTCTTACTTTGGTGCCGCTCCTCAAATATGTCTTTGTTGTATTAAGAGCAAACGACAATGGCCAAGGGGGAACATTTGCGCTTTATTCCTTGCTTTGCCGGCATGCCAAGATTAAAACCATTCCAAACCAGCATCGCACCGATGAAGAGCTTACAACGTATAGTCGGTCAACCTTCCAGGAAAAGTCATTTGCTGCAAAAACTAAGAGATGGTTAGAGGAACAGGCAACTAGGAGGAGTGCCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTGATTGGAGATGGGATTCTGACCCCAGCTATATCCGTTTTGTCAGCAGCTGGTGGCATCAAGGTAAATAAGCCACATATGAGTAATGGTGTGGTTGTCCTGGTTGCTGTCGTAATATTGGTCGGGTTTTTCAGCATGCAACATTATGGTACAGATAGAGTTAGTTGGCTCTTTGCTCCAATTGTCCTCCTTTGGTTTCTCCTAATTGGAGGCATAGGTATATTTAACATCTGGAAACATGGAAGCAGTGTTCTAAAAGCATTCTCGCCGGTGTATATATATCGCTATTTCAAAAGAGGAGGACAGGAAGGCTGGACTTCCCTCGGTGGTATCATGCTCAGTATAACAGGGACGGAGGCTCTTTTTGCCGACTTAGCTCATTTTCCAGTCTCAGCTGTACAGCTTGCATTTACATTAATTGTGTTTCCTTGCCTTCTTTTAGCCTATTCCGGTCAAGCTGCTTACCTTATGAATAACTTGGATCATTCGCAAGATGTTTTCTATCGTTCTATTCCAGATAGAATATACTGGCCAGTGTTTGTCGTTGCAACCGCAGCGGCTATAGTTGCAAGCCAGGCCACAATAACAGCAACCTTTTCAATTATTAAGCAAGCTCTTGCTCATGGATGTTTCCCAAGAGTTAAAGTTGTATATACATCAAAGACATTCCTTGGCCAGATATATATTCCGGACATCAATTGGATCCTTATGATTCTTTGCATTTCTGTTACTGCTGGGTTTGAAAATCAAAACCAGATTGGTAATGCATATGGTACTGCAGTGGTGATAGTCATGCTGGTTACAACATTCCTTATGATTATGATCATGATATTAGTGTGGCGCTGCCATTGGATTCTTGTTCTCATCTTCACCGGCTTATCGTTAATCGTCGAATGCACATATTTTTCCTCTGTACTGTTCAAAATTGATCAAGGTGGATGGGTTCCCTTGGTAATTGCTGGAGCATTTCTTGTTATCATGTATGTTTGGCACTATGGCACGGTGAAGCGCTATGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTAGGCCTTGGCCCCAGTTTGGGGCTGGTTCGAGTCCCGGGAATTGGACTAGTCTACACAGAGCTTGCAAGTGGAGTACCCCACATCTTTTCTCATTTCATCACCAACCTCCCAGCAATCCATTCAGTTGTAGTTTTCGTATGTGTCAAGTATCTTCCTGTCTACACAGTCCCAGAAGAAGAGAGATTCCTTGTCAAGAGGATTGGACCTAAGAATTTCCACATGTTTCGATGTGTGGCACGATATGGATACAAAGACCTGCATAAGAAAGATGAGAGTTTTGAGAAAAAGCTCTTTGATAACCTTTTCATGTTTGTTCGGCTCGAATCTATGATGGAAGGGTGTTCGGATTCGGACGAATACAGCTTATGTGGACAGAAAACAGTGCAGTCCATGGATGGCATGTTGAGTAACAATGGAAACACAAGAACTGCATCATCCAATATGGATATATCAGTTTCCTCACTAGATTCAATAGAACCGGCTAAATCTCCACCGCATGTGAAATCCTCCGGTCAAACAAGCAGCCAGACCGAGGTCGACGAACTCGAGTTCTTGAATAACAACAGGGATGCCGGGGTGGTTCACATACTAGGGAACACTGTGGTGAGGGCAAGGAGAGATTCAAGGTTCTACAAGAAAATAGCAGTTGATTATATATATGCATTCCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCCCATGAAAGTCTCTTAAATGTGGGTCAGATTTTCTATGTATAG 2370 0.4304 MASRVESDEDGDNKGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSAVLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPHGVKDPEDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFQEKSFAAKTKRWLEEQATRRSAILILVLVGTCMVIGDGILTPAISVLSAAGGIKVNKPHMSNGVVVLVAVVILVGFFSMQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKHGSSVLKAFSPVYIYRYFKRGGQEGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLIVFPCLLLAYSGQAAYLMNNLDHSQDVFYRSIPDRIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKTFLGQIYIPDINWILMILCISVTAGFENQNQIGNAYGTAVVIVMLVTTFLMIMIMILVWRCHWILVLIFTGLSLIVECTYFSSVLFKIDQGGWVPLVIAGAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDESFEKKLFDNLFMFVRLESMMEGCSDSDEYSLCGQKTVQSMDGMLSNNGNTRTASSNMDISVSSLDSIEPAKSPPHVKSSGQTSSQTEVDELEFLNNNRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5342 789 Pfam K+ potassium transporter 53 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5342 789 MobiDBLite consensus disorder prediction 1 20 - -
Amo13g5342 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5342 789 PANTHER POTASSIUM TRANSPORTER 2 788 - -
Amo13g5342 789 TIGRFAM kup: potassium uptake protein 52 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5342 Amo-Chr13 153622086 153628820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5342 1 789 Inorganic Solute Cotransporters AT2G35060 79.599 0.0 1264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5342 K03549 - gmx:100776628 1404.42