Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5335 ATGGCCGATGAACCAATGCCCACTCGCTGGTCCTTCCAGGACTTCAAATTGAATTATGATGCGATGTTTGGGAGGAAGAAAGTGGTGGAGAATGGTGAGGCAGCTGATAAAGCTGTTGGTAATGGAAACTTATTGAACCATGCATCCAACGGCAATCTGCAAGCTAAAAGATCATCTGATATGACAATCTTTGAGCAGTTTCAGAGCCAGGGGCAGAATCCGGCGCAGACAAATGGCTTTTCACCAAACCATGGGGACGAAAGGCCGCAAAAGTCTTTGCTTCCACCTTTTGAATCTGCAGAGATGCGTGCTTTAGCAGAGAGCTTAAGTAGGGATATAATTCGTGGGAGTCCAAATGTGAAGTGGGAAAGCATCAAGGGGTTAGGGAATGCCAAACTTTTGCTAAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCTCCATGGAAAGGCATTCTCCTTTTTGGCCCACCAGGGACAGGAAAGACAATGCTTGCAAAGGCTGTTGCAACAGAGTGCCAGACTACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGAGGCATGTTACTCATAACTCTTTTTCCCCCTTGTTTCCAAAGTGATTCCGAGAAGTTGATAAAGGTGTTATTTGAGCTTGCAAGACACCATGCCCCCTCAACCATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGACTAAAAACTGAACTACTCATACAGATGGACGGTTTGGCCAAGACTGATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTCCGCCGTCTTGAGAAGCGAATCCTTGTACCACTCCCAGAACCAGAAGCAAGAAGATCCATGTTCGAGGAACTCCTTCCTCCACAGCCTGATGAGGAAGAGATCCCCTATGATTTGCTAGTGGAGCGGACCGAAGGATATTCAGGGTCAGATATCCGGTTACTCTGCAAAGAGACAGCAATGCAGCCTTTGAGACGCCTAATGTCTCAACTTGAACAGAGACAAGAGGTGGTACCGGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGGTATGAAGATATAGAAGCAGCATTGAAAAACACAAGGCCATCTGCTCACCTACATGCCCATAAATATGAAAAGTTTAATGCTGATTATGGCAGTCAAATACTTCACTGA 1251 0.4508 MADEPMPTRWSFQDFKLNYDAMFGRKKVVENGEAADKAVGNGNLLNHASNGNLQAKRSSDMTIFEQFQSQGQNPAQTNGFSPNHGDERPQKSLLPPFESAEMRALAESLSRDIIRGSPNVKWESIKGLGNAKLLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECQTTFFNISASSVVSKWRGMLLITLFPPCFQSDSEKLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLAKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRSMFEELLPPQPDEEEIPYDLLVERTEGYSGSDIRLLCKETAMQPLRRLMSQLEQRQEVVPEEELPKVGPIRYEDIEAALKNTRPSAHLHAHKYEKFNADYGSQILH* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5335 416 MobiDBLite consensus disorder prediction 69 92 - -
Amo13g5335 416 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 414 - -
Amo13g5335 416 MobiDBLite consensus disorder prediction 69 85 - -
Amo13g5335 416 Gene3D - 118 407 IPR027417 -
Amo13g5335 416 PANTHER AAA DOMAIN-CONTAINING 9 414 - -
Amo13g5335 416 CDD AAA 153 303 - -
Amo13g5335 416 Pfam ATPase family associated with various cellular activities (AAA) 159 302 IPR003959 GO:0005524|GO:0016887
Amo13g5335 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 399 IPR027417 -
Amo13g5335 416 SMART AAA_5 155 305 IPR003593 -
Amo13g5335 416 Pfam AAA+ lid domain 329 365 IPR041569 -
Amo13g5335 416 Gene3D - 304 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5335 Amo-Chr13 153485654 153490438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5335 153 375 Calmodulin-binding Proteins AT3G56690 33.628 6.16e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5335 K07767 - gmx:100794098 676.781