Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5318 ATGCGAAGAATTCAAGGAGAAGAAACGGAGGGAGTGACAGTGACATGGGAGAATTTGTGGGTGACTGTTCCAAACGGAAAGAATACACTACCAATTCTGCAGGGCCTTACAGGCTATGCACAACCGGGGAGGCTTTTGGCTATAATGGGACCTTCCGGCTGTGGCAAAACCACACTTCTTGATGCCTTATCAGGAAGATTGAGCTCAAACATAAAGCAGAAAGGGAATATTCTAATAAATGGCCATAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAAGACGATGCTTTGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCGGCACAGCTTCAATTTCCTGATTCCATGCCCGTATCAGAGAAGAAGGAAAGAGCTGATGTAACTCTCAGGGAAATGGGTCTGCAAAACGCCATTCACACAAGGGTTGGAGGCTGGAGTTCTAAGGGTCTCAGTGGGGGACAGAAAAGGAGACTCAGCATTTGCATTGAGATCTTAACACGCCCAAGACTCCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCCTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTGTTGTTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAACTCTTCCATGACCTTTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCTGCTTCTGATGCTAATCAGTTTTTTGCTTTGAATGGTTTTCCTTGTCCGACACTCCATAATCCTTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGAACAGGAAGCTGAAGAAGGCTTTGGTAGCAGAGTAACTGCAGAGAAAGCTGTTAGTATCCTTGTGAAGTCTTATAGCTTGTCTCAGATTAAGAACAAAGTTTATACAGAAGTGGCAAACATAAATCAACGTGATTTTGGTGCAGTAGAAAAGAAGAGGGACCATGCTGCGTTCCTGATTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGCATTATTTCCGCGACTTAAGCAATTACTGGCTGCGCCTTATTGTGTTTATTGCAATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCCAGAGGATCTCTGCTTGCTTTCTTAAGTTGTCTTTTGTCTTTCATGACACTCGTTGGTGGATTTGCTCCGCTACTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGATGTTACAGCATTTCTCATAGGGAACACATTTTCTGCTGTTCCATACATGCTACTAGTAACTCTGGTTCCGGGATTAATATCCTATTACCTTTGTGGATTCCAAAAAGGACCAGAACACTTGGTATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTGGGAAGTGTCTCCCCTAACTATGTTATAGGCATGTTGATTTCTGGTGGAATTCAAGGAATCATGACCCTAGTTGGTGGATTCTATAGGTTACCAAATGATCTTCCAAAACCCCTATGGAAATATCCTCTGTATTATGTGTCTTTTCAAAAGTATGGACTCCAAGGATTATTCAAGAATGAATTTGAAGGCTTAACATTTATGATGGGCCAAGATGGAGGTGGTAAGAATAACATAAACATTAGTGGTGGGGAGATTCTAATAAAGACATGGCACGTGGAAATGGGACACTCTAAGTGGGTTGATCTTGGAATCTTTTTTGTAATGATTGTTGTGTATAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGAGAAGTTGAGGCCTGCATCTATTTGCTGCTTTCACTAG 1869 0.412 MRRIQGEETEGVTVTWENLWVTVPNGKNTLPILQGLTGYAQPGRLLAIMGPSGCGKTTLLDALSGRLSSNIKQKGNILINGHKQELAYGISGYVTQDDALLSTLTAGETLYYSAQLQFPDSMPVSEKKERADVTLREMGLQNAIHTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTVVASIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFALNGFPCPTLHNPSDHYLRIINKDFEQEAEEGFGSRVTAEKAVSILVKSYSLSQIKNKVYTEVANINQRDFGAVEKKRDHAAFLIQCLVLIRRSALHYFRDLSNYWLRLIVFIAIALSLGSIYYDIGFGVGSIQARGSLLAFLSCLLSFMTLVGGFAPLLEEIKVFERERLNGHYDVTAFLIGNTFSAVPYMLLVTLVPGLISYYLCGFQKGPEHLVYFVSVLFAIVMWVESLMLVVGSVSPNYVIGMLISGGIQGIMTLVGGFYRLPNDLPKPLWKYPLYYVSFQKYGLQGLFKNEFEGLTFMMGQDGGGKNNINISGGEILIKTWHVEMGHSKWVDLGIFFVMIVVYRMLFLAITKSKEKLRPASICCFH* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5318 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 252 IPR027417 -
Amo13g5318 622 Pfam ABC-2 type transporter 216 284 IPR043926 GO:0140359
Amo13g5318 622 Pfam ABC-2 type transporter 336 548 IPR013525 GO:0016020|GO:0140359
Amo13g5318 622 Pfam ABC transporter 34 184 IPR003439 GO:0005524
Amo13g5318 622 Gene3D - 12 320 IPR027417 -
Amo13g5318 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 259 IPR003439 GO:0005524
Amo13g5318 622 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 4 615 - -
Amo13g5318 622 CDD ABCG_EPDR 11 241 - -
Amo13g5318 622 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524
Amo13g5318 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 615 - -
Amo13g5318 622 SMART AAA_5 42 235 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5318 Amo-Chr13 153328738 153331572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5318 30 244 Calmodulin-binding Proteins AT2G36910 24.324 6.76e-07 50.8