Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5311 ATGGATGATGAACTAGAAGACAGCATGGATGAGGAAGAAGTCAGCACAGCAAGGACTCACGACAACTATGAAAGTACATCAGATACTTGTTCGAGTTACTGCTCAAAACCATCAAAGAAGAGGTTGTCATCGAGTCTAGAGAAGTCTGCTGGGACTAGGGGTGACCAGAAAAAGCAACAGGAGATGAAGAGAATGGTGAATATGCTGAGAAGGATTGTGCCCGGCGGTGGTAACCAAATGGATGCAGTTGCTGTTTTAGATGAAGCTGTTAAGTATCTCAAATCTCTTAAGGTTGAAGTGGAGCAATTTGGAGTTGGACCCTGA 324 0.4414 MDDELEDSMDEEEVSTARTHDNYESTSDTCSSYCSKPSKKRLSSSLEKSAGTRGDQKKQQEMKRMVNMLRRIVPGGGNQMDAVAVLDEAVKYLKSLKVEVEQFGVGP* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5311 107 Gene3D - 37 104 IPR036638 GO:0046983
Amo13g5311 107 MobiDBLite consensus disorder prediction 1 62 - -
Amo13g5311 107 PANTHER TRANSCRIPTION FACTOR BHLH144 2 106 - -
Amo13g5311 107 PANTHER TRANSCRIPTION FACTOR BHLH145 2 106 IPR037546 -
Amo13g5311 107 MobiDBLite consensus disorder prediction 20 50 - -
Amo13g5311 107 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
Amo13g5311 107 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 55 102 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5311 12 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 46.535 2.58e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5311 - - mtr:MTR_4g096660 144.821