Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5296 ATGGCAGAGAAGAGTTGCGACGGCGATGGGGCAGTGGGGACGGCGACTGGAGCAGATTCGACGGCGGCGACACAGCTTGAAGAAGAGAGAAGTCTCGGAAGGAAAGGAACATGTGAGCCGTCGAAGGAAAACGCTGATGCCACGCGACTCATGTCACAAAATTACAACAGTATCAACCTACCAATAGTGCTTCCTCTACTGGTTATATGCTGCTGCTTCTCAGCATCATTTACTGCTTTTCTTGAGAACATGTTTCTCTTAGTTTCTGGTTTGCTGACCAATATCTTGAACAGGGTAGATTCCGCTACCTACAAAGAGATTTCACTGTTATGGGGTCTTAAAGATGAAATTGACACCCTCAAGAACTCTCTCAGAATCATCAATGCTTTCCTTGTGGATGCTGAGAACAAGCAAACACAAAATAACGGCATCATGGAGTGGCTGCAGCAGCTCAGGGATCATTTCTTCGATGCTCGTGACATCTTGGATGAGATTGAGTGTGAAGCACTCAGGAACAAGATTGTCAAGAGCCAAGGAAGCTTCAAAAGAAAGGTAAAGCGCTTCTTCTCACTCTCTAACCCTCTTGCATTTCGTATTCAGATGGCTCATAAGATCAAGGAAATTAAGAAGAGAATAGATGAATTAGCTTCTTTTAGGATGAAACTCGGTCTCTCGGAGATTCATGCAAGTAGTAGTGATGTTCATGTTCCAAAGTTGGCTTGGAGGGAGACTAAATCTTATGTTAGGCCTTCCCATGTGATTGGTAGAGATCAGGAGAAAGAGAAGATCATTGGTTTATTGACGGTTCCATCATCAGATTCTGGTAATGAGATTATTGATGTTATTCCAATTGTTGGAATTGGAGGTTTGGGGAAGACCACAATTGCACAACTAGTTTACAATGATGATAGGGTGATCGAGAATTTCTTTCCACGAATGTGGGTGTTTGTCTCTGATGATTTTGATGTTAAGAGGTTGGCATTGGAGATTCTTAAGGCTATGCATGGAATAGATATAGATGCCCATCACAATTATAGTTATGATCAGTTACAGAATTTGCTGCACGAGGGACTAGATGGGAAGAAGTTTCTGCTTGTTCTTGACGACGTTTGGAATGAAGATTATAGAGGGTGGGACGAACTGAGAAATCTGTTAGTAGGAATGCACGATGATGAAAATAACAGAATTGGTAGCAAGATTATCGTGACAACTCGTAGCGAAAAGGTTGCTTCGATCATGGGGAAAGCTTATAAACAGAACCTGCTATATCTTCCTGATGAAGATTGTCTAAAGCTATTTCTCAGGTGTGCATTTCCAGCAGGAGAGGAAAACAAGCACCCGAGGCTTGTGGAAATTGGGAAAGAGATTGTTAGAAAGTGCAAAGGGTTGCCCCTGGCAGTGGTGAGTTTAGGGTGCATGCTTCACTCAGAAAATCGAGAAATTTTTCCCAAGGGTTATGAATATAGCAATTTGGAGCTGATATCATTTTGGATGGCACATGGACTGCTACAAACCAATGACGAAGATGAAGAGGCAGAGGATCTTGGAGAGTTCTATATTCAAGAGCTAGTTTCAAAATCTTTCTTTGAAGGTGTTCCTGAAGATCAAGTAGTTGTTGATGGACTTATTTTTGAAGAACTTAAGCATCTAGGAATATCTTATTTTAAGATGCATGATCTTATTAATGACCTTGCTGTGTCTACTATGCAAAATGAAAGGGCTGCAGTAAAGTTTAATTCAACCAATGTGAGAGAAAATGTGCAGCATTTATCATTTTCTGATAGTAGAGAAGGAGTACCTAATTTTGATAATAAAAGGTTGAGTAAGGTCCAAACGATTGGATTCTGGCATGCAAGTGAAAGTGCAAGTGCAATCACTGAACCATTTCTTAGATGGGTTTTTAAGGAATTCAGGTACCTCAGGGTGTTGAATTTACAATGTTCAAATTTTCAGTTCTTGCCTGATTGTTTTAACAAGATGAAGCATTTGAGGTATCTTAATCTGAGCTATTGCCAAAGGATGGAAAAACTCCCAGATTCCATTTGCAAGCTGCAGAACTTGGAAGTTCTTAATTTGTGTAGATGTGTAGCACTTAAATACATTCCAAAGAACTTGAGGTATCTTGTGAGCCTCAGGATTTTGTGGATCACCACACAAATGAATGATTTGTCTTGTATAGGTTTTAAGACCTTCAGTTCTTTGCAAATATTGATTTTGTGGAATTGTGAAAACTTAACATTCCTTCCACATGATTTGAGACACTTGACTGCTTTGAAAAGGCTTAGTATTGAGGCTTGTCTTGAGGTGACTCATTTTGGAGATGAAGCTGAACAAGAAATTGATGACGACTATTCCTTGAAACTTGAACAATTCTCAATCAACCAACTACCAGAATTGTTAGCATTACCTAATTGGCTAAGAAGATGTTCTAAGACTCTCAGATATCTGGGCCTTTCACAGTGTCAGAGCTTAACAGCATTTCCAGAATGGTTCCCAATTCTGACATCACTTGAAACCCTTCTAATTGCTGATTGTCCAAAGTTAACACTACCACATAATATGGATAATGTTCATAACCTTCAGAACTTGAAGATATTTGGATGCCCTCAACTAGTTGAGAGATGCAAAAGAGATATAGGACCTGATTGGTGTAAAATATCTCATATCCCAAATATTGAATCCCAATCTAACTTGCAGAAAAGAAAGTCTACATTGATAACGGAAGGGAATGCTGCTGCTTTCAAGAAATCAAGGTTGGCAAGCCATGTTGACTCCGTTGAAAGAGAGAGAAAGCAGCAAGATGACTTAATAGAAAAAAAATATGGTGAGGATGAAGATGACGGTGATGTTGAAGACAATACTGATGAAATAAAACCAGAGGCAGATGAGGATGCAAATGATGATCATCGAGAGGAAGCAGAGTACTTACTAGGAGATGATGGCGCAACTGCAGAGGGACTTCATGAAGGTCTACTCATAAAAGATGGAGATGAAGACAGCAAGCTTTCTGCTCGACATTTCAGCCATGGATATCACTTGACCGAAGGAAAGTTGAACCATGGAATGGAGGACTACATTTTTGCTCAACACAAGAAGCTCAATGGTTATGACTTGGGTTTGTATGCAATATTTGATGGTCATTCAGGTCATGATGTTGCCAAATACTTGCAAAGCCATCTATTTGAAAACATACTGAATGAGCCTAGTTTCTGGAAGAAACCAGTGCATGCTGTTAAGAAAGTGTGCAAGGCTACAAATGTTGAGATCTTAGAGAATATAGCTGATTTGCGGGGAGGATCGACAGCTGTTGCAGCAATACTAATTGATGGAGTGAAGCTGCTTGTAGCCAATGTTGGCGATTCTCGAGCGATATCATGCAAAAATGGTATTGCAAAACCAATAACTGCGGATCATGAACCAGAGAAGGAGAAAGATCTTGTTGAAACCAGAGGGGGCTGTGTGTTCACAAGACCAGGATCTATTCCAAGAGTGGACGGCCAATTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACTGCTGAGCCAGATGTGATGATTCGGAAGATTGATGATGACACTGACTTCATCATTTTGGCAAGTGATGGTTTGTGGAAGGTATGA 3636 0.4037 MAEKSCDGDGAVGTATGADSTAATQLEEERSLGRKGTCEPSKENADATRLMSQNYNSINLPIVLPLLVICCCFSASFTAFLENMFLLVSGLLTNILNRVDSATYKEISLLWGLKDEIDTLKNSLRIINAFLVDAENKQTQNNGIMEWLQQLRDHFFDARDILDEIECEALRNKIVKSQGSFKRKVKRFFSLSNPLAFRIQMAHKIKEIKKRIDELASFRMKLGLSEIHASSSDVHVPKLAWRETKSYVRPSHVIGRDQEKEKIIGLLTVPSSDSGNEIIDVIPIVGIGGLGKTTIAQLVYNDDRVIENFFPRMWVFVSDDFDVKRLALEILKAMHGIDIDAHHNYSYDQLQNLLHEGLDGKKFLLVLDDVWNEDYRGWDELRNLLVGMHDDENNRIGSKIIVTTRSEKVASIMGKAYKQNLLYLPDEDCLKLFLRCAFPAGEENKHPRLVEIGKEIVRKCKGLPLAVVSLGCMLHSENREIFPKGYEYSNLELISFWMAHGLLQTNDEDEEAEDLGEFYIQELVSKSFFEGVPEDQVVVDGLIFEELKHLGISYFKMHDLINDLAVSTMQNERAAVKFNSTNVRENVQHLSFSDSREGVPNFDNKRLSKVQTIGFWHASESASAITEPFLRWVFKEFRYLRVLNLQCSNFQFLPDCFNKMKHLRYLNLSYCQRMEKLPDSICKLQNLEVLNLCRCVALKYIPKNLRYLVSLRILWITTQMNDLSCIGFKTFSSLQILILWNCENLTFLPHDLRHLTALKRLSIEACLEVTHFGDEAEQEIDDDYSLKLEQFSINQLPELLALPNWLRRCSKTLRYLGLSQCQSLTAFPEWFPILTSLETLLIADCPKLTLPHNMDNVHNLQNLKIFGCPQLVERCKRDIGPDWCKISHIPNIESQSNLQKRKSTLITEGNAAAFKKSRLASHVDSVERERKQQDDLIEKKYGEDEDDGDVEDNTDEIKPEADEDANDDHREEAEYLLGDDGATAEGLHEGLLIKDGDEDSKLSARHFSHGYHLTEGKLNHGMEDYIFAQHKKLNGYDLGLYAIFDGHSGHDVAKYLQSHLFENILNEPSFWKKPVHAVKKVCKATNVEILENIADLRGGSTAVAAILIDGVKLLVANVGDSRAISCKNGIAKPITADHEPEKEKDLVETRGGCVFTRPGSIPRVDGQLAMTRAFGDGKLKEHITAEPDVMIRKIDDDTDFIILASDGLWKV* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5296 1211 Pfam Protein phosphatase 2C 1021 1211 IPR001932 -
Amo13g5296 1211 PANTHER ALPHABET, ISOFORM E-RELATED 958 1211 - -
Amo13g5296 1211 PRINTS Disease resistance protein signature 460 474 - -
Amo13g5296 1211 PRINTS Disease resistance protein signature 658 674 - -
Amo13g5296 1211 PRINTS Disease resistance protein signature 357 371 - -
Amo13g5296 1211 PRINTS Disease resistance protein signature 281 296 - -
Amo13g5296 1211 ProSiteProfiles PPM-type phosphatase domain profile. 1008 1211 IPR001932 -
Amo13g5296 1211 SUPERFAMILY L domain-like 556 890 - -
Amo13g5296 1211 Gene3D - 92 206 - -
Amo13g5296 1211 MobiDBLite consensus disorder prediction 1 43 - -
Amo13g5296 1211 Gene3D - 1003 1211 IPR036457 -
Amo13g5296 1211 MobiDBLite consensus disorder prediction 28 42 - -
Amo13g5296 1211 Pfam NB-ARC domain 258 477 IPR002182 GO:0043531
Amo13g5296 1211 CDD PP2Cc 1007 1211 IPR001932 -
Amo13g5296 1211 Gene3D - 423 493 IPR042197 -
Amo13g5296 1211 MobiDBLite consensus disorder prediction 940 969 - -
Amo13g5296 1211 CDD RX-CC_like 88 217 IPR038005 -
Amo13g5296 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 477 IPR027417 -
Amo13g5296 1211 SUPERFAMILY PP2C-like 1005 1211 IPR036457 -
Amo13g5296 1211 MobiDBLite consensus disorder prediction 922 969 - -
Amo13g5296 1211 Gene3D - 241 419 IPR027417 -
Amo13g5296 1211 SMART PP2C_4 998 1211 IPR001932 -
Amo13g5296 1211 Pfam Rx N-terminal domain 92 180 IPR041118 -
Amo13g5296 1211 Gene3D Ribonuclease Inhibitor 549 920 IPR032675 -
Amo13g5296 1211 MobiDBLite consensus disorder prediction 922 939 - -
Amo13g5296 1211 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 958 1211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5296 Amo-Chr13 153124014 153130840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5296 1005 1211 PP2C-type Phosphatase Gene Family AT2G34740 62.981 1.06e-86 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5296 - - cam:101500245 1098.96