Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5270 ATGGTGGTGTTGGGTCTTTCTGCTGGTGTGGTTACAGCCCTGCTGGGTGTAGTTTTGGTGGTAACTTTGATTGTAAAGAATGTGAACTGGTTTTTTTACGAAGCTAAGTTGGGAGCGAAGAAGCGCAGTCTTCTTCCTCCGGGTGACTTGGGTTTACCTTTTGTTGGTAATATGTGGTCTTTCCTCTCTGCTTATAAATCTCCCAATCCTGAAACTTTTATCAACTCATTCTACTCCAGGTATGGGAAAACTGGAATGTACAAGTCTCTAATGTTCGGAAGCCCAGGAATCATTGTTACAACACCCGAATTGAGCAGAAAGATTCTGACGGATGATGAAAACTTCAAGCTTGGGTGGCCTCGATCAACAATTGAGCTTGTTGGAGAGAAATCTTTCATTGCAATGGGCGATGAAGATCACAAGCGTCTTAGGCGTTTGACTTCTGCTTCAATCAACGGCTTGGAACCACTCTCCATGTACTTGGCTTTCATGGACGAACTCATGAAAAACGAATTGGAAAAATGGTCCAAGATGGGTCAAATTGAGTTGTTGACTGAACTCAGAAGGCTTACCTTTAAGATCATCATCCACATTTTCCTTGGCGCCTCCAGCACTTCTGTTATGGAAGCTTTGGAAAAGGAATACACTAAGCTCAACTATGGCATGAGAGCTTTGCGCATTGATCTTCCCGGTTTTGCATTCCACAAAGCCTTCAAGGCTAGAAAGAATCTGGTTAGCATATTTCAAAGTGTTGTGAATGAGAGGAGAAAGGAGAAGTTAGAAAATCCAAACAAAACAGCAAAAGATATGTTGGATCAATTGATTGATGCTGAAGACGAGAACGGTAGGAAATTGGCTGATGATGAAGTGATTGACATTATGATAATGTATTTGAATGCTGGACATGAATCTTCTGGACACACTACCATGTGGGCTACTTTGATTCTTCAACAGCACCCTCAGTATTTCCAAAAGGCTAAGCAAGAACAGGAAGAGATAGTGAAGCGGAGGCCACCAAATCAGAAGGGTATGACAATGAAGGAATATAGGCAGATGGATTTCCTCTCAAAGGCAATTGATGAAACTATGCGCTATATTACCTTCTCTTTAATGACATTCCGGGAGGCAAAGCGTGATGTCAAACTGAATGGTTTTCTTATTCCCGAAGGTTGGAAGGTTTTTGTTTGGTATAGGGCTATTCACCAAGACCCTCAGGTTTATCCTAATCCAAGGATATTTGATCCTTCAAGATTTGATGCCCCCCGCAAGGCTGGTGAGTTTCTGCCATTTGGGTTGGGAACCAGATTGTGCCCTGGGAATGAGCTTGCCAAATTGGAAATCACAGTGTTTCTTCATCACTTTCTGCTGAACTACAAGCTTGAGCATACAAATCCAAATGCTCCCATAATGTTCCTTCCTCATACAAGGCCCGTGGACAATTGCTTGGCTAGAGTTGTCAGACTTACCCCTTATTCCAATTAG 1482 0.4258 MVVLGLSAGVVTALLGVVLVVTLIVKNVNWFFYEAKLGAKKRSLLPPGDLGLPFVGNMWSFLSAYKSPNPETFINSFYSRYGKTGMYKSLMFGSPGIIVTTPELSRKILTDDENFKLGWPRSTIELVGEKSFIAMGDEDHKRLRRLTSASINGLEPLSMYLAFMDELMKNELEKWSKMGQIELLTELRRLTFKIIIHIFLGASSTSVMEALEKEYTKLNYGMRALRIDLPGFAFHKAFKARKNLVSIFQSVVNERRKEKLENPNKTAKDMLDQLIDAEDENGRKLADDEVIDIMIMYLNAGHESSGHTTMWATLILQQHPQYFQKAKQEQEEIVKRRPPNQKGMTMKEYRQMDFLSKAIDETMRYITFSLMTFREAKRDVKLNGFLIPEGWKVFVWYRAIHQDPQVYPNPRIFDPSRFDAPRKAGEFLPFGLGTRLCPGNELAKLEITVFLHHFLLNYKLEHTNPNAPIMFLPHTRPVDNCLARVVRLTPYSN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5270 493 Gene3D Cytochrome P450 36 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PANTHER ENT-KAURENOIC ACID OXIDASE 2 15 476 - -
Amo13g5270 493 PANTHER CYTOCHROME P450 26 15 476 - -
Amo13g5270 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Amo13g5270 493 Pfam Cytochrome P450 46 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 SUPERFAMILY Cytochrome P450 42 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g5270 493 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5270 Amo-Chr13 152828162 152830845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5270 18 490 Cytochrome P450 AT2G32440 59.705 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5270 K04123 - gmx:100781238 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5270 13 152828162 152830845 Amo13g5270 13 152828162 152830845 ECH