Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5261 ATGGCTACCATTTCTGCGACTTGCTACCTCTATATTCTATCATGGTTATGGTTATGCACCATGACACTATGTGGAACAGTGTTAGAAGACCTAAAAAACTTGCATCCACCTCCAGATTTTAACTCCACAATCATGACAAACTGTCTCAATAACCCTTCGCTTAGGTACTGCAGTTCCACTCCCATGAACTTTGATGAAATATTCAAATACACCATTGTTGCTAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGCATAGAATCCTTCCCCAAAGTTGATCTTAGAAACCGTCCAAACATTGCACCTCTTTACTTGTCATTTGAATTCTTCTGGAGGTATTGCCCCCTAACCATTGTTTCCATTGATGTGTCAAACAACTCTTTGAAGGGGAATTTTCCTATTGATGTTCTTCATTGCACTCAAATCCATGCTCTTGATTTAAGCATCAATGAGTTTTCTGGTGATATTCCAATTCAGAGTTTCTCTCCTCTCACCAACCTTACTTTCCTTAACCTATCCTATAACTGCTTCTCTGAGAGTGAAGAACTATCTGATTCACAGTTCTTCAAAAGGTTTAATTCTTCAAGTTTTCTTCATTCTGGTGCACTCTTGGATCACAGAAGGTTCTTCACATTGAAGGTTGTGATCTTATTGGTTGGTTTTCCCATCCTTGTCATTCTGATTGTGATATTCTTAAATTTAGTAGGGAAGAGTGATGTTGTTCACATCTACAAAGGGGTCTTGAGAGACGGCACACAAGTGAAAATTGAGATGTATTGGGATGAGATATCAAGGGAGAGATATCGTAAATTTGTTGAAGAATGCAAGGTGCTCTCTGAGTTAGACCACAAGAACCTTGTTAGGGTTCTAGGGTGGTGTAAGAGCAGAAAATTCAGGGCTGTTATCACAGAATGGACAAGAAAGGAGAATGTTGAAATAGTCAAAGTGTTAATGGGAGTTGTAGAATGCATGCAGTATCTGCAGGAGGAATGGCCTCAAGTTGACTATGSTCTCAACACAAGTAGTGTKCTATTGACTCAAGATTTGGAACCATTAATTTCAAGGTTCAAAGTTGTAGATCATAACATTAGTACTACAAGAATGATACTAAATAAGGGTCAAGAGGAGTTTGAAGGGGATGCAGGTGGGTTCATTAAGTATATGAGAAGAGTTGATCCTGAAGAGTTGCAACAGATGATTGATGAGAGAATGGAACTAGGTGAGACTAGTTTTCATCAAGTTAAACAGGCTGTATCCCTTGGATTAATGTGCATAGACCAATCAAACAGTGAGCAACCGAGCTTGGCCTTCATATCTAATAGCATTGCCAGAGTCTACAAGGCTACCCTTGTTTTGCCATCTGCAAATCATACAATAACAAGATCCCATGGAGGCCATAGATTTAAGGGACACAAGACATAA 1425 0.3923 MATISATCYLYILSWLWLCTMTLCGTVLEDLKNLHPPPDFNSTIMTNCLNNPSLRYCSSTPMNFDEIFKYTIVASHLCNESKNPNCIESFPKVDLRNRPNIAPLYLSFEFFWRYCPLTIVSIDVSNNSLKGNFPIDVLHCTQIHALDLSINEFSGDIPIQSFSPLTNLTFLNLSYNCFSESEELSDSQFFKRFNSSSFLHSGALLDHRRFFTLKVVILLVGFPILVILIVIFLNLVGKSDVVHIYKGVLRDGTQVKIEMYWDEISRERYRKFVEECKVLSELDHKNLVRVLGWCKSRKFRAVITEWTRKENVEIVKVLMGVVECMQYLQEEWPQVDYXLNTSSVLLTQDLEPLISRFKVVDHNISTTRMILNKGQEEFEGDAGGFIKYMRRVDPEELQQMIDERMELGETSFHQVKQAVSLGLMCIDQSNSEQPSLAFISNSIARVYKATLVLPSANHTITRSHGGHRFKGHKT* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5261 474 Pfam Protein tyrosine and serine/threonine kinase 234 311 IPR001245 GO:0004672|GO:0006468
Amo13g5261 474 ProSiteProfiles Leucine-rich repeat profile. 167 188 IPR001611 GO:0005515
Amo13g5261 474 Gene3D Ribonuclease Inhibitor 69 192 IPR032675 -
Amo13g5261 474 SUPERFAMILY L domain-like 85 181 - -
Amo13g5261 474 SUPERFAMILY Protein kinase-like (PK-like) 232 441 IPR011009 -
Amo13g5261 474 ProSiteProfiles Protein kinase domain profile. 230 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5261 474 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 233 - -
Amo13g5261 474 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 234 472 - -
Amo13g5261 474 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 234 472 - -
Amo13g5261 474 Gene3D Phosphorylase Kinase; domain 1 232 306 - -
Amo13g5261 474 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5261 Amo-Chr13 152684468 152686210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5261 116 360 Receptor kinase-like Gene Family AT5G56040 21.086 4.18e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g5261 PK_Tyr_Ser-Thr 1.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5261 - - ahf:112771647 895.19