Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5248 ATGGGTCAGAAATTTTCTCATGAAGGGGTTAATAGTGAGCATATACCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGATGAAGTTAACGAGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGATTATCATGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATTAGGGACGAAGATATATGTCATTTTCACTTTTCTGATGTCAACATTGCGTTTGAGTTCTACAATAGATATGTAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGAAAGAGTCGTGCGGACGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAAACCACAAAATAATAATGGCATTGGAAATTTTAAGAAAAAACCTACACCAGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTCTAGATGCACCTAGTGGTCGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGATGCTGACCTCGCATCTGTGAATGGAAGACCCAGTATGCAAACGTGTTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTTATATGTTCCAACCAATCCTTGTACGAGCTGCATCAATGAAGGAGAGAATAATCTTGGAAGTGGAGTTGTCATTACTAACCTTTTCTTCGCTTGCCATTAAGCAAAGATTTGCAACCTCGTCGTCATCGGAGTCGGATTCATCCTCGTTCTCCCATGATATTTTTGGACAATTGGGTTTAATGTGTCCAACTTCTCCACACTCATAG 831 0.3971 MGQKFSHEGVNSEHIPYDQYEQEEEKHDEVNEDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDICHFHFSDVNIAFEFYNRYVRTRGFSARKNRTRKSRADVLKLKNFVCHREGFKPQNNNGIGNFKKKPTPETRCGCSAMMEIRLDAPSGRTIWLSSFNTLIDADLASVNGRPSMQTCFQQLERSAANVYTLSIFYMFQPILVRAASMKERIILEVELSLLTFSSLAIKQRFATSSSSESDSSSFSHDIFGQLGLMCPTSPHS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5248 276 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 14 167 - -
Amo13g5248 276 Coils Coil 17 40 - -
Amo13g5248 276 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 167 - -
Amo13g5248 276 MobiDBLite consensus disorder prediction 1 26 - -
Amo13g5248 276 Pfam FAR1 DNA-binding domain 89 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5248 Amo-Chr13 152473053 152480478 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g5248 FAR1 2.7e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5248 - - ahf:112723376 320.472