Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5223 ATGGTGTCGCAGCCCCCTTTCCTTCTCCATCGAACACCGACAGACCCTGAGAAGAGTCAGGACCTTGCCTCAAACCAGAAGCTTGCTACTCATGGGTGTTGCCTTCTCCGTCTTTGCCCTCCAGGCCGCGTGCTGCTGTCCTCCTCCTTGAGCAACTTCACTCCTAGAGAGACTATGTCATGGGTTACTTTCCACATAAACATTTTTAGTTTTGAGATGGATGACTTGTCCAAGAGCCAGATGTTTGTGATTCATGGTGTTGCTGCAGTTGGCTCTGTGGCTTTTGCTTCTGCTCTCACATATCCCCTCGACACCATGAAAGTCCTGACTCAGGTTGCTTCTAGTTCCGGTAAACAATTGAATGCTGCCGAGCTCTTGCTTAGAATTCTCACTCTCTCTGGTAATTCAGGTCTGTTTAGTGGTTATGGATCGTTAGCACTTGGAAGGACTCTTGGTCTCGGAGCTCGATTTGGGGTCTATGAAATCATCACTGCCTTTTATAAGGATGGGCTGGAAGATAATTATGTCTCTGCTTCTGATGCTCTTTTGGCTGGAATGGCAGCTGGTGCTGTAGAGGCTTTGATAAGCTCTCCATTTGAACTTATCAAGCTTCGTGAACAGGTTTCCTCAGCTTCATACATTCCGAACTCTACTTTTGCTTTGGAAAAGGGAGCCCAACCACCTTTAATTTCAAGATTACTGAGTGGCTGTTATCCTGACAAGAGATCCTTGAACCAATATGTCGGTCTCATCTCTACCCTATCTACCAAAAATACTAATGTGACAAGTGCACTGCTGGAGTATCCTTGGATGATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTCAGAAGGCCATCTGATATTATATCATTGGAAGGATGGGGCGCATTATGGAGAGGTCTTCGTTCGGGAATTGCTCGAGATTCTGTGTTTGGTGGTGTATTTTTCTCAAGCTGGCAGTTTCTGCATCAAGCAATGCTTGATTGGAAGGCTGTAGGGATGGATCCTCCGCCCAGGTCAGATGAAGAAGTTGGTCCATTGTCTCCTTTATTTGTTAGTATTGCTGCTGGATTGTCAGCTTCAGTTGCTGCTGCGGCTTCTCATGCCTTTGATACTACAAGAACTAGATCACAGTGCACTGTGCTACCAAAGTATGTTTCAATGGAGAGAAGGCTCCTGAAGTGGAAACAGCCAGGAAACAAGTTTGAAAGATATACCGGGATCCATCCTTCTGACAGGAATCTATTGTTCCGTGGTCTTCGGTGGCGGATGGCTCGCTCTGGGCTTGCATCATTCATGATTGTAGGAAGTTATTTCTTCGCTGTCGATCATCTTGCTTCTAATTTGACTTGA 1359 0.4614 MVSQPPFLLHRTPTDPEKSQDLASNQKLATHGCCLLRLCPPGRVLLSSSLSNFTPRETMSWVTFHINIFSFEMDDLSKSQMFVIHGVAAVGSVAFASALTYPLDTMKVLTQVASSSGKQLNAAELLLRILTLSGNSGLFSGYGSLALGRTLGLGARFGVYEIITAFYKDGLEDNYVSASDALLAGMAAGAVEALISSPFELIKLREQVSSASYIPNSTFALEKGAQPPLISRLLSGCYPDKRSLNQYVGLISTLSTKNTNVTSALLEYPWMMTGSGKPPSVCNVRRPSDIISLEGWGALWRGLRSGIARDSVFGGVFFSSWQFLHQAMLDWKAVGMDPPPRSDEEVGPLSPLFVSIAAGLSASVAAAASHAFDTTRTRSQCTVLPKYVSMERRLLKWKQPGNKFERYTGIHPSDRNLLFRGLRWRMARSGLASFMIVGSYFFAVDHLASNLT* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5223 452 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 74 448 - -
Amo13g5223 452 Gene3D Mitochondrial carrier domain 82 451 IPR023395 -
Amo13g5223 452 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 166 IPR018108 -
Amo13g5223 452 SUPERFAMILY Mitochondrial carrier 82 437 IPR023395 -
Amo13g5223 452 MobiDBLite consensus disorder prediction 1 23 - -
Amo13g5223 452 Pfam Mitochondrial carrier protein 82 168 IPR018108 -
Amo13g5223 452 PANTHER CARRIER PROTEIN 74 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5223 Amo-Chr13 152182599 152185890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5223 101 330 Antiporters AT1G79900 24.621 2.85e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5223 - - ahf:112734472 709.523