Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5198 ATGGCTGAGTACGGGGATCCAGAGAGGGGTTCGTCGATGGATTCCACGGAATCGAGGTGGGTTTTCCAGGAAGACGAGGACGATGCCTCCGAGATTGATGAGTTCGAGGCCGATTTGCGGCACCACCATTCTGTTCTGGATTCTGAGGACGAGGATAATGGCGAGCAGAGGCTCGTTCGAACTGGCCCGCGAATCGATTCCTTCGATGTTGAAGCTCTTGAGGTCCCTGGTGTTCAGAGAAACGAATTTGAGGATGTCAACATGGGAAAGAGAATCATATTGGCTTTTCAAACTCTTGGTGTTGTATTTGGTGATGTTGGAACGAGTCCATTATATACCTTCAGTGTTATGTTCAGGAAGGCCCCTATTAATGACAATGAGGACATTATTGGGGCATTGTCACTTGTATTGTATACTCTAATATTGATTCCTTTGGTGAAGTATGTACTGGTTGTTCTGTGGGCCAACGATGATGGTGAAGGTGGCACATTTGCCTTGTACTCTTTGATTTGTCGTAATGCTAAGGTGAGTCTACTTCCCAATCAGTTGCCATCAGATGCCCGGATATCAGGATTTAGGCTGAAGGTGCCTTCCCCTGAGCTTGAAAGGTCATTAAAATTCAAGGAAAGGCTAGAGTCTTCAGTGACTCTCAAGAAGATTCTGCTTCTATTAGTGCTTGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTAACACCGGCAATGTCAGTTCTATCATCTGTTAATGGTTTGCGAGTCGGCGTAGATGCAATTGAGCAAGATGAAGTAGTGATGATTTCTGTTACTTGCCTCATCATCTTGTTCAGTGTGCAGAAGTATGGAACAAGTAAAATGGGGCTTGCTGTAGGACCTGCTTTGTTCATATGGTTTTGCTCTCTTGCGGGCATTGGGATATACAATCTAGTCACATATGACACTAGTGTCTTGAGGGCCTTTAATCCTATTCACATCTATTATTTCTTCGCAAGGAATTCAACCAAAGCATGGTATTCACTAGGGGGCTGTATTTTGTGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGTTATTTCTCTGTTCGATCAGTTCAGCTTACGTTTGTCTTTCTTGTTTTGCCGTGTTTACTATTGGGTTATTTGGGTCAAGCAGCATATCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGAGGTGCATTCTGGCCAACTTTCCTCATTGCTCTTGTTGCTGCACTAATTGCTAGCCGGGCTATGACGACAGCCACATTTTCATGTATAAAGCAGTCAACTGCACTTGGTTGTTTTCCTCGTCTAAAAATAGTTCATACTTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTATTGGTTGTTTCCCTGGTGTTTGTCTGCTCTATATCCAACATTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGGTCCTTATATGGCAGACACACATCATCATAGTGCTAAGTTTTGTGGTAGTCTTCTTGGGATTGGAGTTGGCTTTCTTTTCCTCAGTTTTGTGTAGTATACCGGATGGAAGTTGGATTATACTGGTCTTAAGCATAATAAATTTTTTTATAATGTTCGTATGGAATTATGGAAGCAAACTTAAATATGAAACTGAAGTCAAGCAGAAGCTGTCAATGGATTTAATGCGAGAATTGGGCTCCAATCTGGGGACAATACGAGCTCCTGGGATTGGGTTACTTTATAATGAGTTGGTCAAAGGAATTCCAGGAATTTTTGGACATTTTCTAACCACACTTCCTGCAATACACTCCATGATCATATTTGTGAGTATCAAGTATGTTCCAGTTTCTATGGTACCTCAAAGTGAAAGGTTCCTGTTCAGGCGAGTCTGCCAGAAAAGCTATCATATATTTCGTTGTATTGCCAGGTATGGCTACAAAGATGTTCGCAAAGAAAATCACCAGACTTTTGAGCAGCTATTGATGGAGAGCCTAGAGAAGTTTATACGTCGAGAAGCTCAAGAGAGGTCACTTGAGAGTGATGGGGATGATGATAGTGATTCAGAAGATGACTATTCTGCTTCTAGGGTCCTCATAGCTCCCAATGGGAGTGTTTACTCACTCGGCGTTCCCCTTCTGGCTGAATTTAATGATACAAACATTCCCACTTTTGAAGCAAGCACATCAGAGGAGGTGGCTTCAGCATCTTCAAATAATCCCCCAGTGCTTGACGCAGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTATCTTGTTGGTCATGGGGATATACGGGCTAGGAAAGACTCCTGGTTCTTAAAGAAGCTAGTTATTAACTATTTTTATGCCTTTTTGAGAAAGAACTGCAGGAGGGGTATCGCAAACTTAAGTGTACCCCATTCAAATCTGATGCAGGTTGGCATGACTTACATGGTTTGA 2526 0.4248 MAEYGDPERGSSMDSTESRWVFQEDEDDASEIDEFEADLRHHHSVLDSEDEDNGEQRLVRTGPRIDSFDVEALEVPGVQRNEFEDVNMGKRIILAFQTLGVVFGDVGTSPLYTFSVMFRKAPINDNEDIIGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLPSDARISGFRLKVPSPELERSLKFKERLESSVTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLRVGVDAIEQDEVVMISVTCLIILFSVQKYGTSKMGLAVGPALFIWFCSLAGIGIYNLVTYDTSVLRAFNPIHIYYFFARNSTKAWYSLGGCILCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFSSVPRGAFWPTFLIALVAALIASRAMTTATFSCIKQSTALGCFPRLKIVHTSRKFMGQIYIPVINWFLLVVSLVFVCSISNIDEIGNAYGIAELGVMMMTTILVTLVMVLIWQTHIIIVLSFVVVFLGLELAFFSSVLCSIPDGSWIILVLSIINFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVSMVPQSERFLFRRVCQKSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDDYSASRVLIAPNGSVYSLGVPLLAEFNDTNIPTFEASTSEEVASASSNNPPVLDAEQSLERELSFIRKAKESGVVYLVGHGDIRARKDSWFLKKLVINYFYAFLRKNCRRGIANLSVPHSNLMQVGMTYMV* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5198 841 TIGRFAM kup: potassium uptake protein 94 841 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5198 841 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5198 841 MobiDBLite consensus disorder prediction 1 28 - -
Amo13g5198 841 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5198 841 PANTHER POTASSIUM TRANSPORTER 16 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5198 Amo-Chr13 151908245 151913624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5198 11 841 Inorganic Solute Cotransporters AT5G09400 77.605 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5198 - - gmx:100778388 1402.88