Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5183 ATGGCTTCTCTTCATCATCACCCTCTTCCATATTCTGAAGCCAAACCCAACAATTCAATTGTTCTAGAGATTCATCATGATGAGACCATCACTACTACTAGTAGTGCTGTGGCACATATGGAGGAGGCTTCAAGAAAGAGCAATGGAGAAGAGAAGAGCAATCCTATCTGTTTGACATGGAAGGATCTTTGGGTGAGGGCTTCCATGGGGAAGAGAGGGACCAAAGCTATCCTTCAGGGGCTAACCGGTTATGCCAAACCGGGTCAGCTCTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCAACACTTCTTGATACTTTAGCAGGTAGATTGGGTTCAAACACAAGACAAACCGGAGAGATTCTTGTCAATGGTCACAAACAATCACTGGCTTATGGAAGCACGGCATACGTGACACAAGACGATACCTTAATAACATCATTAACAGTGAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAGTTACCTGATTCCATGTCAAAGGCAGAGAAGAAAGAGAGAGCAGAGTTCACAATCAGAGAGATGGGTTTGCAAGATGCCATCAACACTAGAATTGGTGGCTGGGGTTGCAAAGGAATCAGCGGTGGTCAGAAGAGGCGTGTAAGCATCTGCATTGAGATATTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCTTACTATGTCATGAAAAGAATTAAATCTCTTGATCATAAAGATGGTATTCAAAGGACTATCATAGCGTCAATTCATCAGCCAAGTGCTGAAGTTTTCCAATTCTTTGATAATCTCTGTTTGCTCTCTGCTGGAAAAACAGTTTACTTTGGACCTGCTTCTGATGCAATTCAGTTCTTCGCTTCAAATGGTTTTCCTTGTCCCGCTCTTCAAAATCCATCTGATCACTTATTGAAAACTATAAACAAGGACTTTGATCAGGAAATGGAGGTAGGTGTAGCCGGGACGAGTGGAGGAGCATTACCGGCAGAAGCAGCAATCGGAATCCTTGTGAACGCATACAAAGCCTCAGAAATAAACGAACAAGTTCAAACGGAAGTAACTGCCATATCTAAAATGGAAACTAGCTCCGTAGAGAAGAAGAGAGGACATGCTAGCTTCCTTAGGCAGTGCATTGTTCTTACAAAAAGATCATTTGTGAACATGTCCCGCGATCTAGGCTATTATTGGCTACGCCTTGCTATATATATTGCCTTGGCTATAAGTTTAGCCACTATCTTCTATCATTTAGACACAAGTTATGCTTCAATTAAGGATAGAGGGTCACTTCTTGCATTTGTATCCACTTTCATAACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTGGAAGATATGAAGGTATTCGAAAGAGAAAGGCTAAATGGGCATTATGGTGTGAGTGCGTTTGTGATAGGAAATACCTTATCAGCCATCCCATTTGTGTTGATAGTTTCTTTCATTCCGGGAGCTATAGCATACTACCTCCCTGGTCTCCAGAGTGGATACGACCACTTCCTTTACTTCATTTGTGTTCTATTTTCTTGCCTCATGTTAGTGGAGAGCCTCATGATGATAGTTGCAAGCGTGGTTCCAAACTACCTCATGGGAATCATACTCGGCTCTGGAATACAAGGCATCATGATCTTAGTTGCTGGCTTCTTCAAACTGCCAAGCACCATTCCTAAGCCATTTTGGAGATACCCTTTGCATTACATAGCATTCCACACTTATGCGTTCCAAGGATTGTTCAAGAACGAATATGAAGGCTTGAAATTCCATGGAGGGTCATCACACAAGTACATTACGGGTGAAGAGATTATGAGGGACACGTGGCAAACAGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATATTAGCAGGGATGATTGGTGTGTATCGTGTTATGTTTTTGGTTATCATAAAGATTACTGAGAAGGTGAAGCCTATTGTTGGATCCTTCAAGCTCATGTCTCCCAAACAAACAATTCATGTCGTCGAAAATCCCAATGCTACTCCTTTGCATGTGGAGTTTGTATGA 2067 0.4253 MASLHHHPLPYSEAKPNNSIVLEIHHDETITTTSSAVAHMEEASRKSNGEEKSNPICLTWKDLWVRASMGKRGTKAILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILVNGHKQSLAYGSTAYVTQDDTLITSLTVREAVYYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIKSLDHKDGIQRTIIASIHQPSAEVFQFFDNLCLLSAGKTVYFGPASDAIQFFASNGFPCPALQNPSDHLLKTINKDFDQEMEVGVAGTSGGALPAEAAIGILVNAYKASEINEQVQTEVTAISKMETSSVEKKRGHASFLRQCIVLTKRSFVNMSRDLGYYWLRLAIYIALAISLATIFYHLDTSYASIKDRGSLLAFVSTFITFMSIGGFPSFVEDMKVFERERLNGHYGVSAFVIGNTLSAIPFVLIVSFIPGAIAYYLPGLQSGYDHFLYFICVLFSCLMLVESLMMIVASVVPNYLMGIILGSGIQGIMILVAGFFKLPSTIPKPFWRYPLHYIAFHTYAFQGLFKNEYEGLKFHGGSSHKYITGEEIMRDTWQTDMSYSKWVDLAILAGMIGVYRVMFLVIIKITEKVKPIVGSFKLMSPKQTIHVVENPNATPLHVEFV* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5183 688 SMART AAA_5 87 281 IPR003593 -
Amo13g5183 688 Pfam ABC-2 type transporter 384 596 IPR013525 GO:0016020|GO:0140359
Amo13g5183 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 296 IPR027417 -
Amo13g5183 688 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Amo13g5183 688 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
Amo13g5183 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 304 IPR003439 GO:0005524
Amo13g5183 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 684 - -
Amo13g5183 688 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 23 684 - -
Amo13g5183 688 Pfam ABC-2 type transporter 261 364 IPR043926 GO:0140359
Amo13g5183 688 Gene3D - 43 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5183 Amo-Chr13 151686565 151692577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5183 88 241 Calmodulin-binding Proteins AT2G36910 30.303 1.34e-09 59.7