Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5181 ATGGGAGGCACTCAGGGAGAAGAAAAGGAAGACGTAACAGTGACATGGCAGAATTTGTGGGTTACTGTTGCAGATGGAAACAAAAGGAAACCAATTCTGCAGGGTCTCACCGGTTATGCTCAACCGGGGAAACTTTTGGCCATAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATGCCTTATCAGGGAGATTAAGCTCTAGCGTCAAACAGACGGGTAAAATTTTAATCAATGGCCACAAACAAGCACTGGCTTATGGAACTTCGGGATATGTAACACAAGATGATGCTATGCTGTCAACTTTGACCGCTGGGGAAACTTTATACTACTCAGCTCAGCTCCAGTTTCCAGATTCCATGTCCACTTCTGAGAAGAAGGAACGAGCTGATATAACACTGAGGGAAATGGGACTCCAAGATGCCATTGGTACAAGGGTTGGAGGATGGGGTTCTAAAGGCCTAAGTGGTGGACAAAAGAGGAGACTCAGCATCTGCATTGAGATCCTAACACGCCCAAAGCTTCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGCAAGCCTAAGCCTAAGGGATGGCATCCAAAGAACTATTGTTGCTTCAATCCATCAACCAAGTAGTGAAGTCTTTGAACTCTTCCATGATCTCTGTCTTCTGTCTTCTGGTCAAGCAGTATATTTTGGTCAAGCGTCTCATGCTAATCAGTTTTTTTCTTCAAATGGCTTTCCTTGCCCAGCTCTCCACAATCCCTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGACCAAGATGTTGAAGAAGGTTTTGGATTCGGAGTTACTGCTGAAGTAGCAATTGACATCCTTGTAAAGTCTTATGGATCATCTGAGATTAAAAACCAAGTTAATAATGTAGTGGCAACAATAACTGAAAGTGTAAGTTCATGTTACATTCCTTACATATATCTCTATGCCAAATATGAAAAACTAACCTTTGCATACCTACAGAATTCAGGAGCAGTTGGGAAGAAGAGGGTCAACGCCACATTCCTCACTCAGTGCCTCGTTCTTATGAGAAGATCTTCGCTGCGATTGTTTCGCGACTTGAGCAATTACTGGCTGCTTCTTGTTGTCTTTATTGCAGTAGCTATTAGCATGGGTTCCATGTTCTATAACATTGGCTCAAGTAATGGATCAATTCAAGGAAGAGGGTCTCTGCTTACTTTTTTGATATCAACTCTGGCATTCATGGCTCTTATTGGAGGATTCGCTCCATTAATGGAGGAAATGAGGGTATTTGAAAGAGAGAGACTAAATGGTCACTATGGTATTATTGCTTTTCTCACAGGCAAAATATTCTCAGCACTTCCATATATGCTAATGATATGTCTAATTCCTGGAGGAATAATATATTACCTCTCAGGGCTGCAGAGAGGTTTAGAACACTTTGTGTACTTTGCTTCTGTTCTGTTTGCCATTGTGCTTTGGGTTGAGAGCCTCATGATGGTTGTGGGGAGTATGTTTCCCAATTTCGTAACCGGCATGAGCATTGCCGGCGGAATTCAAGGACTAACCATCTTAACTGGTGGATTCTACAGGCTGCCAAACGATCTTCCAAAACCATTTTGGAAATACCCCTTTTACTACCTTTCATTCCTTAAGTATGCTTTCCAAGGATGTTTCAAGAATGAATTTGAAGGCTTAAAATTTTCCATGGAACAAGGTGGAAGTGCAAAAACCATTATTAGTGGTAGAGACATTTTGACAAACACATGGCAGGTGGAAATGGGGCATTCCAAGTGGGTTGATCTTGCCATCATGTTTGGGATGATTGTTGTATATAGGGTTGTGTATTTGGCTATTACAAAAAGCAAGGAGAAGTTGAAACCTCTTGCTGCTTCCATTAACAATCACCCAACAAAAGTTTTCACCAGAGAGATTAGAATTAATGATAGAGCAAGCCCTCCTCATGCTAGTGATTGTGAATTACCAAACAACATGCTACCCGTTTTGTTGGAATATGAGACCACATTTGAGGTGGAAGCCATGAATGAGGTGGATCATCAAGAGGAGAAGGGGGTTTTCATAACATGGGAGGATCTATGGGTGACAGTCTCAGATGGCAAGAATGGAAGGAAAGCAATACTTCAGGGCCTGAAAGGTTATGCCAAACCAGGGCAACTCTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAGTCTACTCTTCTTGATGCCTTAGCAGGGAGATTAGGTTCAAAGTCAAAGCAAACTGGGATGATCCTAATCAATGGCCGCAAACAAGCACTGGCATATGGAACATCTGCATATGTCACAGAAGATGATACTATCTTGACAACACTGACAGTTGGAGAAGCTGTATACTACTCAGCCCAGCTCCAATTACCAGATTCCATGTCCAAATCAGAGAAGAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGCCTGCAAGATGCCATCAACACAAGAATTGGAGGGTGGGGATCTAAGGGAATTAGTGGTGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCAAGACTCTTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCCTCTTATTATGTTATGAGTAGAATTGCAAGCTTAAATAAAAAAAATGGAATTCAAATGACTATTATTGCATCAATCCATCAACCAAGTAATGAAATCTTTCAGCTTTTCAACAATCTCTGTCTCCTCTCTTCTGGTAAAACAGTCTACTTCGGACCTGTCTCAGCTGCCAATAAGTTTTTCTCATCAAATGGTTTTCCTTGCCCAAGTCTCCAGAATCCTCCTGATCACTTTGTAAAAATTATTAACAAGGATTTTGAACAGGAGGAGGACCCTGAGAAAGGATTAGCTAGAGGGCTAACCACAGAAGAAGCAATTCATATACTTGTTGAATCATATGATTCATCTGAAATTAGTCACCAAGTTCATAAAGAAATAGCTCAAATGAAAAAAAGGGACTCAGATGCAATGGAGAAGAAAAGTCATGCTGATTTTTTAACACAGTGCATGGTCCTTACTAGGAGATCTTTTGTGAACATGTATCGTGAAGTAGGCTACCACTGGTTGCGCCTACTTATCTATGGTGCTCTGGCTTTAAGTCTTGGTACCATGTTTTTTGACATTGGCTCAAGCAGTGAATCAATTCAGGCCAGAGCTTCACTGCTTGTGTTTGTTGTTACATTCCTTACCTTCATTACTGTTGGTGCATTCCCTTCTTTTGTGGAAGATATGAAGCCCAAACACCACCATCTTTTCCACACCATGAAGAAGCTGTTCCTCCTTGGCACCTGGAAGTGCAACTGCTGGAAGCAAAGGTTCCGACTTTTCACCACCCTTTTGGAAGATTTGGATACCCCTCGTCTCCGTCACGTGATCGCCACCAACATTTCCATTAGCAGGAGAGTTAAATCCGGCGAACCTGAATTAGCACGCCACCTGTTCGACGATATGCCGCTTCGAACTGTTTCCACTTGGAATACTATGATTTCCGGATATTCGCAATGGGGCTGCTACGTTGAAGCTCTGGCCCTTGCTTCCCTCATGCACCACTCTTGCGTCAAGCTTGACGAGTGTTGTGGAATTGGAGAAGCTAAGCAAGGACGGTTGCTTCATGGCCACTTAACCAAGACACCGTTCCAAGCAAATGACATGGAAGTAGGGGAGAAAGCTGCTGAAAAGTTGTTTAGCTTGGATCCGAACCCAACAGTGCCTTTGGTAATTCTTCACCAAGTTCATAAAGAAATAGTTCAAAAAAAAAAAAAGGTGAGCTATCACTGGTTGCGCCTACTTATCTATGGTGCTCTGACTTTAAGTCTTGGTACCATGTTCTTTGACATTGGCTCAAGCAGTGAATCAATTCAGGTGTTTGAAAGAAAAAGACTGAATGGACATTATGGGGTAACTGCATACACCATTTGCAACACATTATCTTTAGTTCCATTCTTGCTATTGATGTCACTGATCCCTGGAGCAGTGGTTTATTACCTAGTTGGACTTCACCAAGGACACCAAGAATTCATCTACTTTACATCTATACTTTTTGTTTCTGTCTTTTTGGTTGAGGGTCTCATGATGATTGTTGCAAGCATTGTCCCCAATTTTCTGCTAGGCATAATCTTCGGCACCGGAATATTGGGATATGCATACCAAGGATTGTTCAAGAACGCGTTTCAAGGCCTAACATTCACCGGCAATAATCAAGATGGAGGATCTATGATAAACATTAGTGGGGAAGAGATACTTAGAAACTTGTGGCAAGTGAAAATTGGTTACTCAAAATGGAATGATGTTGTTATATTGATAGGAATGGCAGTGACATACAGAATTTGGTTCTTGGTAATCATCAAGAGCTTTGAGAAAGTGAAGCCTATTGTTGTGACAGCAATGAATAATTGCCCGCAAGCAAAGTTCAGGTTCACTAAGATACTGAGTAATAGTGGTTATGATTATCGTATGGATTACAAGATTGCATTGCCCTTGGATGAATAA 4566 0.4159 MGGTQGEEKEDVTVTWQNLWVTVADGNKRKPILQGLTGYAQPGKLLAIMGPSGCGKSTLLDALSGRLSSSVKQTGKILINGHKQALAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSTSEKKERADITLREMGLQDAIGTRVGGWGSKGLSGGQKRRLSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIASLSLRDGIQRTIVASIHQPSSEVFELFHDLCLLSSGQAVYFGQASHANQFFSSNGFPCPALHNPSDHYLRIINKDFDQDVEEGFGFGVTAEVAIDILVKSYGSSEIKNQVNNVVATITESVSSCYIPYIYLYAKYEKLTFAYLQNSGAVGKKRVNATFLTQCLVLMRRSSLRLFRDLSNYWLLLVVFIAVAISMGSMFYNIGSSNGSIQGRGSLLTFLISTLAFMALIGGFAPLMEEMRVFERERLNGHYGIIAFLTGKIFSALPYMLMICLIPGGIIYYLSGLQRGLEHFVYFASVLFAIVLWVESLMMVVGSMFPNFVTGMSIAGGIQGLTILTGGFYRLPNDLPKPFWKYPFYYLSFLKYAFQGCFKNEFEGLKFSMEQGGSAKTIISGRDILTNTWQVEMGHSKWVDLAIMFGMIVVYRVVYLAITKSKEKLKPLAASINNHPTKVFTREIRINDRASPPHASDCELPNNMLPVLLEYETTFEVEAMNEVDHQEEKGVFITWEDLWVTVSDGKNGRKAILQGLKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKSKQTGMILINGRKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAQLQLPDSMSKSEKKERAEFTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLNKKNGIQMTIIASIHQPSNEIFQLFNNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQNPPDHFVKIINKDFEQEEDPEKGLARGLTTEEAIHILVESYDSSEISHQVHKEIAQMKKRDSDAMEKKSHADFLTQCMVLTRRSFVNMYREVGYHWLRLLIYGALALSLGTMFFDIGSSSESIQARASLLVFVVTFLTFITVGAFPSFVEDMKPKHHHLFHTMKKLFLLGTWKCNCWKQRFRLFTTLLEDLDTPRLRHVIATNISISRRVKSGEPELARHLFDDMPLRTVSTWNTMISGYSQWGCYVEALALASLMHHSCVKLDECCGIGEAKQGRLLHGHLTKTPFQANDMEVGEKAAEKLFSLDPNPTVPLVILHQVHKEIVQKKKKVSYHWLRLLIYGALTLSLGTMFFDIGSSSESIQVFERKRLNGHYGVTAYTICNTLSLVPFLLLMSLIPGAVVYYLVGLHQGHQEFIYFTSILFVSVFLVEGLMMIVASIVPNFLLGIIFGTGILGYAYQGLFKNAFQGLTFTGNNQDGGSMINISGEEILRNLWQVKIGYSKWNDVVILIGMAVTYRIWFLVIIKSFEKVKPIVVTAMNNCPQAKFRFTKILSNSGYDYRMDYKIALPLDE* 1522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5181 1521 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 703 949 IPR003439 GO:0005524
Amo13g5181 1521 Pfam ABC transporter 725 874 IPR003439 GO:0005524
Amo13g5181 1521 Gene3D Tetratricopeptide repeat domain 1104 1225 IPR011990 GO:0005515
Amo13g5181 1521 Pfam PPR repeat 1182 1208 IPR002885 -
Amo13g5181 1521 Pfam ABC-2 type transporter 906 1007 IPR043926 GO:0140359
Amo13g5181 1521 Pfam ABC-2 type transporter 216 274 IPR043926 GO:0140359
Amo13g5181 1521 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 259 IPR003439 GO:0005524
Amo13g5181 1521 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524
Amo13g5181 1521 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 694 1104 - -
Amo13g5181 1521 CDD ABCG_EPDR 12 241 - -
Amo13g5181 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 703 938 IPR027417 -
Amo13g5181 1521 SMART AAA_5 42 235 IPR003593 -
Amo13g5181 1521 SMART AAA_5 732 921 IPR003593 -
Amo13g5181 1521 TIGRFAM PPR: pentatricopeptide repeat domain 1183 1215 IPR002885 -
Amo13g5181 1521 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1180 1214 IPR002885 -
Amo13g5181 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 249 IPR027417 -
Amo13g5181 1521 Pfam ABC-2 type transporter 1288 1404 IPR013525 GO:0016020|GO:0140359
Amo13g5181 1521 Pfam ABC-2 type transporter 359 572 IPR013525 GO:0016020|GO:0140359
Amo13g5181 1521 Pfam ABC-2 type transporter 1026 1103 IPR013525 GO:0016020|GO:0140359
Amo13g5181 1521 Gene3D - 702 970 IPR027417 -
Amo13g5181 1521 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 694 1104 - -
Amo13g5181 1521 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 8 653 - -
Amo13g5181 1521 Pfam ABC transporter 34 184 IPR003439 GO:0005524
Amo13g5181 1521 Gene3D - 3 253 IPR027417 -
Amo13g5181 1521 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1271 1313 - -
Amo13g5181 1521 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1405 1488 - -
Amo13g5181 1521 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1310 1405 - -
Amo13g5181 1521 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 8 653 - -
Amo13g5181 1521 ProSitePatterns ABC transporters family signature. 846 860 IPR017871 GO:0005524
Amo13g5181 1521 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 1271 1313 - -
Amo13g5181 1521 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 1405 1488 - -
Amo13g5181 1521 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 1310 1405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5181 Amo-Chr13 151651269 151669616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5181 722 884 Calmodulin-binding Proteins AT2G36910 29.341 2.19e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5181 K05681 - gmx:100790102 938.332