LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g5131	ATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAGTTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCACCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTTTATGGTACGGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGAAGTATGGGGGTGGACTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGCTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCAAGATTATTTCATGGCTCGTGACTGCTCTGGTGATAGTGATCAATGGCTACCTTCTGCTGGAATTCTTCTCGCACGAAGTGAATGGCGCAATAGTCGGCACTGTAGTGTGCGTGCTAACAACTGCATATGTTGCATTCATAGTATACCTTATTTCACGGGCCGTTACGTATTCGCCTTGGCAAAGTGTGACACAGCGAAAGTCAATTACTAACTCAGAGTTAGAGTAA	942	0.4236	MAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLKIISWLVTALVIVINGYLLLEFFSHEVNGAIVGTVVCVLTTAYVAFIVYLISRAVTYSPWQSVTQRKSITNSELE*	314

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g5131	313	PANTHER	METAL TRANSPORTER NRAMP3 PROTEIN	1	310	-	-
	Amo13g5131	313	Pfam	Natural resistance-associated macrophage protein	1	235	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Amo13g5131	313	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	1	310	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Amo13g5131	313	PRINTS	Natural resistance-associated macrophage protein signature	171	188	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Amo13g5131	313	PRINTS	Natural resistance-associated macrophage protein signature	36	59	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Amo13g5131	313	PRINTS	Natural resistance-associated macrophage protein signature	205	224	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Amo13g5131	313	PRINTS	Natural resistance-associated macrophage protein signature	143	162	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g5131	Amo-Chr13	150943258	150946650	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo13g5131	1	298	Inorganic Solute Cotransporters	AT2G23150	79.195	6.03e-176	495

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g5131	K21398		-	gmx:100807811	549.28