Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5126 ATGTCCAAACCTTGGGGCAATATCGGAAACTGGGCGGCGGAAGCTGAACGGGCCGAAGCGGAGGAGCGGGAGGCCGCCGCCGCTGCCGCCGCCAACCCGCAGGGCTTCCCAAGCCTCAAGGAGGCCGTTAACGCGAAGCCTAAGAAGAAGAAGATGACGCTATCGGAGTTCGCAACCTATACTTCCGGTGGCGGTGGTGCGTTGGAGTCCAAACGCTTGACGCAGGACGAGATGCTCAGTCTCCCGACGGGGCCGAAGGAGCGGTCCGCAGACGAAATGCAGTACAACCGGCTCGGCGGCGGGTTCTCATCCTACGGTCGCTCCGGTGGGTCTTCGATGGGTCGCTCCAGGGACCGCGAAGGGAACGGCGAGGGTTCCTGGGGCGGAGGGAGGAGATCGTTCGGCGGATTGGAAGATGAGCGCAGGGGTCCGAGTCCTAGGGTTTCAGATATCGACCAACCTTCCAGGGCTGACGAGGTGGATAACTGGGCCTCGGGGAAGAAATTGCCCTCGTCTTTCGATTCCGGCCGGCAGAATAGATATAGTTCTCTTGGCAGCGGCGGAGGCGGTGGTGGCATTGGTGGCGGAGGCGGAGGTAGTGGATTTGGTGGTAGCTCTAGAGCTGACGAGGTAGATAATTGGACATTTGGAAAGAAGCCTGTTCCCGCCAGATCTTCAACTTTTGGTTCCGGTTTTCGCGATTCTGGCGGGGAGCAAGATCGCTGGTCGAGGGGACCACCACGAGGGGAGCAGTCGGATCGCTGGTCGAGGGGACCAGTGCGCGAGGAGCGGCCAAAGTTGGTGTTGGAACCACCGAGAGGCGATGCTTCTGCCAATGAAGTACCGGTGGTGAAAAGTAATAAGCCGAACCCTTTCGGTGCGGCGAGGCCGAGGGAGGAAGTTTTGGCAGAGAAAGGAGTGGATTGGAAGAAGCTGGAAACAGATTTGGATGCGAAGAAGTCTACTAGTCGGCCTTCGAGTGCACACTCCAGTAGGCCTTCCAGCGCCCAATCCAACCGCTCTGAAAGTCTCGGGCCTGCTGAAGCTGTGGCAAAGCCCAAACCCAAGGTGAATCCTTTTGGGGACGCCAAACCCAGGGAGCTTTTGCTGAGGGAGCGAGGTATTGATTGGCGGAAGGTTGATCTTGATTTGGAGCATCGCGCTGTTGACAGGCCTGAGACAGAGGAAGAAAAATTATTAAAAGAAGAAATTGATCGTTTGAGGAAGGAAGCTGAGAAAGAGTCTACTATAAATTCGAATAAAGAATCTTCAAATGAGACTGATGCAGAACAAAGCAGTACACAAGAAATATTATTGCAGAAAGAGAGGGAGCTTGAACATCTTATACGTGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCATCGGCAGGAAGGTCTGTTGTTTATTCTGATAGGCCACATTCTCGATCAAGCTCAATCTCAATTGAGGATTCTAGAGGTGAGTCTGCAGACAGACCTCGATCCCGTGGCACAAGTGATACATGGGCGGGTCCTAATGATGACCAAAGATCGTATCGAGGAAGCAAGGACAGGAGAGGGTTTTTGAGCAGCAGAGACGTGAATAGGTCAAGGTCAAGAGAGAGATGGTGA 1632 0.5441 MSKPWGNIGNWAAEAERAEAEEREAAAAAAANPQGFPSLKEAVNAKPKKKKMTLSEFATYTSGGGGALESKRLTQDEMLSLPTGPKERSADEMQYNRLGGGFSSYGRSGGSSMGRSRDREGNGEGSWGGGRRSFGGLEDERRGPSPRVSDIDQPSRADEVDNWASGKKLPSSFDSGRQNRYSSLGSGGGGGGIGGGGGGSGFGGSSRADEVDNWTFGKKPVPARSSTFGSGFRDSGGEQDRWSRGPPRGEQSDRWSRGPVREERPKLVLEPPRGDASANEVPVVKSNKPNPFGAARPREEVLAEKGVDWKKLETDLDAKKSTSRPSSAHSSRPSSAQSNRSESLGPAEAVAKPKPKVNPFGDAKPRELLLRERGIDWRKVDLDLEHRAVDRPETEEEKLLKEEIDRLRKEAEKESTINSNKESSNETDAEQSSTQEILLQKERELEHLIRDLDDKVRFGQKAVERPGSSAGRSVVYSDRPHSRSSSISIEDSRGESADRPRSRGTSDTWAGPNDDQRSYRGSKDRRGFLSSRDVNRSRSRERW* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5126 543 MobiDBLite consensus disorder prediction 237 270 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 298 322 - -
Amo13g5126 543 Pfam Plant specific eukaryotic initiation factor 4B 1 525 IPR010433 GO:0003743
Amo13g5126 543 MobiDBLite consensus disorder prediction 484 502 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 456 543 - -
Amo13g5126 543 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 543 IPR010433 GO:0003743
Amo13g5126 543 MobiDBLite consensus disorder prediction 1 365 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 517 543 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 420 436 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 408 439 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 168 185 - -
Amo13g5126 543 Coils Coil 394 417 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 323 344 - -
Amo13g5126 543 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 543 - -
Amo13g5126 543 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5126 Amo-Chr13 150855064 150859503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5126 1 543 Eukaryotic Initiation Factors Gene Family AT3G26400 55.417 3.69e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5126 - - aip:107631697 847.425