Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5104 ATGTGTTTAATTTCAATCTTTTACAGCATTGCTGTCTACAAGGCATTATACAAGAGGTTTGGTGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGACATGGTTGACATAATATGCTTGTCAATCACTCCAAATAGGCGCCCTCCTGGTATTGCAACTTTCGTCAATCCAATAGACATGTCATTGCTATCAGCTGTAAAAGCTGGTATATTTGTAGTGCAAGCTGCTGGCAATACTGGACCCTCACCTATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGAGCAGCCTCTCATGATCGACTTTATAGCAATTCCATCATTCTTGGAAATAATATGACCATACCTGGAGTTGGACTCGCACCTGGAACACCTAAAAACATAATGTATAAACTGGTTCATGCGCATCATGCTTTGAACAATGACACAACAGTTAAAGATGATATGTATGTGGGTGAGTGTCAAGATGAAAGTAAATTCAATCAGGATTTGGTACAGGGAAACATCCTGATCTGTAGCTATACGATCCGATTTGTGGTTGGGCTATCCACCATCAAGAGTGCCTTAGAAATGGCCAACAATCTTAGTGCAATTGGTCTTGTTTTCTGCATGGACCCTCTTGTGACTAGTTTTCAGCTTAACCCAGTTCCAATGAAAATGGCTGGCATAATAATTGCATCTGCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCACTTGAAATAGATGAGACTTCAAAGAAAGTTGTTAAACTAGGGGCTGTTGCTAGCATCTGCGGTGGACTAAAAGCAAACTATAGCAATGATGCTCCAAAGGTTATGTATTACTCTGCTAGAGGACCAGACCCTCAGGACAGTCTTCCTCATGAAGCTGATATTTTGAAACCCAATTTGATTGCTCCTGGAAATTTTATATGGGCAGCTTGGAGTTCTCTTTCCACTGATTCAGCTGAATTCCTAGGTGAGAATTTTGCTTTAATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCCGGTCTTGCTGCACTCATTAAGCAAAAGTTCCCCCATTTCAGTCCTGCAGCCATTGCGTCTGCTCTTTCCACCACAGCTTCTCTGTATGACAGCATTGGTAAGCCAATAATGGCTCAGCGGTCATATGCCTCTCCAGACTTCAGCCAATCTCCGGCAACTCCCTTCGACATGGGAAGCGGTTTTGTGAATGCTACTTCAGCATTAGATCCGGGATTGCTTTTTGATTCCAGTAAGTCACTCAAAAGGTGCACTGGGATCTTCAAACAAAACTTAGTGAAACAATAG 1323 0.4248 MCLISIFYSIAVYKALYKRFGGFAADVVAAIDQAAQDMVDIICLSITPNRRPPGIATFVNPIDMSLLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGAASHDRLYSNSIILGNNMTIPGVGLAPGTPKNIMYKLVHAHHALNNDTTVKDDMYVGECQDESKFNQDLVQGNILICSYTIRFVVGLSTIKSALEMANNLSAIGLVFCMDPLVTSFQLNPVPMKMAGIIIASANDSKILLQYYNSSLEIDETSKKVVKLGAVASICGGLKANYSNDAPKVMYYSARGPDPQDSLPHEADILKPNLIAPGNFIWAAWSSLSTDSAEFLGENFALMSGTSMAAPHVAGLAALIKQKFPHFSPAAIASALSTTASLYDSIGKPIMAQRSYASPDFSQSPATPFDMGSGFVNATSALDPGLLFDSSKSLKRCTGIFKQNLVKQ* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5104 440 Gene3D Peptidase S8/S53 domain 10 423 IPR036852 GO:0004252|GO:0006508
Amo13g5104 440 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 10 422 - -
Amo13g5104 440 SUPERFAMILY Subtilisin-like 9 418 IPR036852 GO:0004252|GO:0006508
Amo13g5104 440 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 422 IPR045051 -
Amo13g5104 440 CDD PA_subtilisin_like 112 247 - -
Amo13g5104 440 Pfam Subtilase family 10 376 IPR000209 GO:0006508|GO:0008236
Amo13g5104 440 ProSitePatterns Serine proteases, subtilase family, serine active site. 337 347 IPR023828 -
Amo13g5104 440 Gene3D - 106 274 - -
Amo13g5104 440 ProSiteProfiles Serine proteases, subtilase domain profile. 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5104 Amo-Chr13 150538615 150542796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5104 10 423 Subtilisin-like Serine Gene Family AT4G20430 73.012 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5104 - - gmx:100820468 665.996