Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5073 ATGACGAAGGTCAAGAAGAAGGCCAGCGGAGCGAGGCTGTGGATGCGGTTTGATCGGTCGGGGGGGTCGGAGCTGGTTGAGCTTGATAAGAACGCCATCATCCGCCACGCCGCAATTCCTACCCGGGACCTCAGGATCTTGGGCCCTGTCTTCTCCCAATCCTCCAATATTCTTGCTAGGAGGAAAGCTATGGTGGTTAATTTGGAGTTTATAAAGGCTATAGTCACAGCTGAAGACGTGCTATTGCTTGATCCTCTACGCCAGGAAGTTCTTCCGTTCGTTGAACAACTCAGGCAACAAATTCCACATAAAACTCAACCTCAACTTCGTGGGCCTGCTGGTGAACAAGAAAGTGAAATGCAGGTTCCGACCGGCAGACAGTGGTTGCCTGTGCCAGAGTCTGCTGAAGGGTTGCAATCTGAGCTTCCATTTGAGTTTCAGGTTTTGGAGATTGCTTTAGAAGTTGTGTGTACCTCTCTGGACTCAAGTGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTATTAGATGATTTGGCTAGAAATGTTAGTAACCAAGAATCTTGA 564 0.4911 MTKVKKKASGARLWMRFDRSGGSELVELDKNAIIRHAAIPTRDLRILGPVFSQSSNILARRKAMVVNLEFIKAIVTAEDVLLLDPLRQEVLPFVEQLRQQIPHKTQPQLRGPAGEQESEMQVPTGRQWLPVPESAEGLQSELPFEFQVLEIALEVVCTSLDSSVADLERGAYPVLDDLARNVSNQES* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5073 187 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 2 185 - -
Amo13g5073 187 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 185 IPR039204 -
Amo13g5073 187 Gene3D Magnesium transport protein CorA, transmembrane region 92 187 - -
Amo13g5073 187 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5073 Amo-Chr13 150153536 150156109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5073 3 185 MRS2 Gene Family AT3G58970 65.027 2.30e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5073 K16075 - gmx:100812561 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5073 13 150153536 150156109 Amo20g0968 20 16490448 16493625 PCT
Amo13g5073 13 150153536 150156109 Amo10g0556 10 6045798 6051803 PCT