Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5057 ATGGGTGGTGGTGGTGGTGGAACGCTCGTGGAAGGGATTCGACGCTTATTCCAAAGACGTGCTTCTTCAGCTATTAAAGGGGACGATCGTATTATTATCGATAATAATAATAATAATAATAACAATAATAATAATAATAGGAGCGATGTGTTGTTGGTGAGAGATTTGCGGGCACAATTGGCCTCTATTCCCACTAGCAATCAAGAAACTGAACTCACCATTGACGATGACTTTGATATCTCTGGATTGAAGCCCCTCAAAGTCCCTACCCAGATCTTCTTCAAACACTCTTCCATGGATCCCCACAAAAAGGGTTCTGCAGAAGCTGAGTTTTTTACTGAGTATGGAGAGGCAAGCCGATACCAAATCCACGAAGTCATCGGGAAAGGAAGTTATGGCGTCGTGGGCTCTGCCCTTGACACTCATACCGGGGAAAAAGTTGCAATCAAGAAAATCAATGATGTTTTTGAACATGTATCGGATGCTACAAGAATCCTAAGAGAAATTAAGCTCCTGCGCTTACTTCGCCATCCTGATATAGTAGAAATTAAACATATTATGCTTCCTCCTTCCCGTCGAGAGTTCAAGGATATCTACGTTGTCTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCAAATGATGATCTTACACCTGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATATATACATACAGCAAATGTTTTTCATCGTGACTTAAAGCCCAAAAATATTCTTGCCAATGCTGATTGCAAACTAAAGATATGTGATTTTGGACTTGCTCGAGTTTCTTTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGGGCACCTGAATTATGTGGTTCTTTTTTCTCTAAATATACCCCTGCAATTGATATCTGGAGCATTGGATGCATATTTGCAGAAATGCTCAATGGAAAGCCATTGTTTCCGGGTAAAAATGTGGTGCACCAATTGGATCTCATGACCGATTTGCTTGGCAGTCCTCCACCTGAGTCCATTGCAAGGATTCGAAATGAGAAAGCTAGAAGATATCTTAGTGGCATGCGAAAGAAGCAACGAGTTCCGTTATCTCAAAAATTTCCAACTTCAGATCCATTGGCTCTTCGATTACTGGAGCGCTTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCTTTAGCCGATCCTTATTTTCGAGGCTTGTCGAATGTGGATCGTGAGCCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTCCAGGAATATCTTCGTGGAGGAGAACAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAGGGTGAGCGAAGCACTCCTTTGCAGAGACAGCATGCCTCCTTACCCAGAGAGCGAGTTTGTGTTCCAAAGGATGAGAAAAACAAAAATGATGAAAGACCCAGCGGTTCAAATTTGTCTAATCCTCGAGAGTCTGATGCTGCTGGAAACACCAATGCAGAAAATGGGCCCTCAAAGCCAAACAACAGCACACGTTGCCTCTTGAAAAGTGCCAGCATTAGCGGTTCAAGGAGTTATGAGAAACCAAGTAAAGAACCAGAGGAGGAACCAATCGCGGAGGTCAATGAGGATATGGTAGATGGATTGACAGAGAAAGTTGCTGCTATAAATGTTTAG 1815 0.4248 MGGGGGGTLVEGIRRLFQRRASSAIKGDDRIIIDNNNNNNNNNNNNRSDVLLVRDLRAQLASIPTSNQETELTIDDDFDISGLKPLKVPTQIFFKHSSMDPHKKGSAEAEFFTEYGEASRYQIHEVIGKGSYGVVGSALDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLNGKPLFPGKNVVHQLDLMTDLLGSPPPESIARIRNEKARRYLSGMRKKQRVPLSQKFPTSDPLALRLLERLLAFDPKDRPTAEEALADPYFRGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCVPKDEKNKNDERPSGSNLSNPRESDAAGNTNAENGPSKPNNSTRCLLKSASISGSRSYEKPSKEPEEEPIAEVNEDMVDGLTEKVAAINV* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5057 604 MobiDBLite consensus disorder prediction 510 526 - -
Amo13g5057 604 ProSitePatterns Protein kinases ATP-binding region signature. 127 151 IPR017441 GO:0005524
Amo13g5057 604 MobiDBLite consensus disorder prediction 491 592 - -
Amo13g5057 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 81 539 - -
Amo13g5057 604 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 81 539 - -
Amo13g5057 604 MobiDBLite consensus disorder prediction 527 572 - -
Amo13g5057 604 SMART serkin_6 121 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5057 604 Gene3D Phosphorylase Kinase; domain 1 137 458 - -
Amo13g5057 604 SUPERFAMILY Protein kinase-like (PK-like) 117 417 IPR011009 -
Amo13g5057 604 Gene3D Transferase(Phosphotransferase) domain 1 207 435 - -
Amo13g5057 604 ProSiteProfiles Protein kinase domain profile. 121 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5057 604 ProSitePatterns MAP kinase signature. 156 259 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo13g5057 604 Pfam Protein kinase domain 121 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5057 604 CDD STKc_TDY_MAPK 120 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5057 Amo-Chr13 149966678 149970829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5057 108 604 MAP Kinase Gene Family AT3G18040 80.754 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo13g5057 Pkinase 5.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5057 - - gmx:100780831 939.102