Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5032 ATGGCAAATTCAAAAGGCTCATCGAATTATAGGAATTTGATGTATCCTGGAAAACATGCCCTGCTTCCTCCTAAAATCCCATTTCCTAGTGCTTCTCAAGCATATGCTGATTATATCCCAAATCCTGCGGTTGGTTCTGGTCAGAAACCTAGAGAAGGAAACATACAGCACCATCGTACTTCATCTGAGAGTCTTGTCATAGAGGAGCAACCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCAGTTCGAAGAGGCGTCCATCGGCGCTCATCGAGTGATTCTTTTGCATACGTAGACACACACAATATGTCTAACATCACTTATGGAGATCAGGATGAATATAAATATAAGAACTTATTATCTTTCCCATCTTGGTCATCTCAAGACTTTGATCATAACAAAGATGCTCATCATATACTCATGCATGCTGAGATGAATTCAGCAAAACAGAACATTAGATCATGGGACTCATTTTCAAATATTACAAATCATCCAGCTGGTGTTCTCTCTGGCAAAGACAGTGTTGCTTTCCAGGGTTCGGGATCACTATGCCCCCCACCACATGAAGCAGAGGGGCTTCCGTCAACTGCAAATGAAAACCATGATGCAGCGGAATCTGGCATACAGGATTCAAAATCATCTTCTGAGAAAAAGGATGGTTCACATGCAAAGTCATCTGCTTCTGAAACAGATACAAAACGTGCCAAACAGCAATTTGCTCAACGTTCAAGGGTTCGTAAACTTCAATATATAGCTGAGCTGGAAAGAAATGTACAAGCTCTACAGGCAGAAGGGTGTGAAATATCAGCTGAACTGGAATTTCTCAACCAGCAGAATCTTATACTGAGTATGGAGAATAAAGCACTCAAGCATCGTTTAGAAAGTACAGCGCAGGAGCAGCTTATCAAATACTTGGAGCAGGAAGTGCTGGAAAGAGAGATTGGAAGATTACGCGCACTGTATCAGCAGCAACAACAGCTCTCGCACCAGCCACAACAACAACCGTCTGCTAGTCACAGACGCACCAACAGCAGAGACCTTGAGTCTCAGTTTACAAACCTTTCTCTCAAACACAAGGACAGCGGCTCAGGGCATGACCCTGCAACTGGTGCGCTTAGAATTTAA 1134 0.4321 MANSKGSSNYRNLMYPGKHALLPPKIPFPSASQAYADYIPNPAVGSGQKPREGNIQHHRTSSESLVIEEQPSWLDDLLNEPETPVRRGVHRRSSSDSFAYVDTHNMSNITYGDQDEYKYKNLLSFPSWSSQDFDHNKDAHHILMHAEMNSAKQNIRSWDSFSNITNHPAGVLSGKDSVAFQGSGSLCPPPHEAEGLPSTANENHDAAESGIQDSKSSSEKKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGCEISAELEFLNQQNLILSMENKALKHRLESTAQEQLIKYLEQEVLEREIGRLRALYQQQQQLSHQPQQQPSASHRRTNSRDLESQFTNLSLKHKDSGSGHDPATGALRI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5032 377 MobiDBLite consensus disorder prediction 326 377 - -
Amo13g5032 377 SMART brlzneu 232 291 IPR004827 GO:0003700|GO:0006355
Amo13g5032 377 Coils Coil 247 267 - -
Amo13g5032 377 MobiDBLite consensus disorder prediction 181 243 - -
Amo13g5032 377 Coils Coil 310 330 - -
Amo13g5032 377 MobiDBLite consensus disorder prediction 41 64 - -
Amo13g5032 377 CDD bZIP_plant_RF2 234 282 IPR044759 GO:0003700|GO:0006355
Amo13g5032 377 Gene3D - 226 293 - -
Amo13g5032 377 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 1 366 IPR044797 -
Amo13g5032 377 MobiDBLite consensus disorder prediction 326 343 - -
Amo13g5032 377 PANTHER - 1 366 - -
Amo13g5032 377 SUPERFAMILY Leucine zipper domain 243 285 IPR046347 GO:0003700|GO:0006355
Amo13g5032 377 MobiDBLite consensus disorder prediction 214 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5032 Amo-Chr13 149632877 149636503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5032 20 306 bZIP Transcription Factor Family AT2G42380 29.508 1.07e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5032 - - gmx:100813098 572.778