Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5028 ATGATGGATCTTCCTCCTCCACTGTGTCCTGATGATGAAATCTTCCGTGAGAAGGTTCAGAAGAAGAAAACATGGAAGCAAGAGATCCTCCTGTCGTTTCAAATTGTTGGAGTAGTTTATGGTCAACTTAGCACTGCACCCTTATATGTGTTCGGTACAATGGATGCGAAAGCTCTTGCATCGGAGGAGGTCGTTTATGAACTCTTCTCCTTCATTTTCTGGACTTTGACAATGATTTCTTTGCTTAAGTATGCCTCTATAGTGCTCAAGGCTGATGATAAAGGAGAGGGTGGTACGTTTGCGTTGTACTCGCTATTGTGTAGAAATGCAAAAGTTGGCCTGCTCCCTAGTGATAGAAGTGCCAATCAGATTATGAATTGTGAGGGGAGAACTCCTTCAAAGATCAGAGCAAGAAGGGTGATTGAGAAAAGCAAGATCTGTCACTATTTACTGTTGTTCTTAGCCCTCTTTGGTTCCTGTATGGCCATTGGGGATGCAGTGCTCACTCCAGCTCTTTCAGTGTTTTCAGCTTCTACTGGCGTTCAGAGATCCTTATCTGATATAATAGCAGACATGTATCCATCGTCACGCCGTGCTCGCGAGTCAGACACAGTGTCTAATGCCTTACACAGATATGTAACTGTTCCCGCTGCGTGTGCTATATTGGTTGGCTTGTTCATGTTGCAGAACTGTGGGACGCGTAAAATTGGCTTCATGTTTGCTCCAATTATTTCTGCTTGGCTCTTGTTTATTGGAGTGGTGGGAATTTATAATATTTTCCATTGGGATGTCAAAATCATTTATAAAATATCCCCGGTATACGTCTTCAAATTTATCAGAAATTTCAATTATCACAGATGGAAATTGTTAGGAAGCATCATTTTATGCGTGGGAGGATCAGAGGCAATGTTTGCAGACCTAGGCCATTTCTCCAAGAAATCAATCAAAATTACATTTATATGCTTGATCTACCCGATTCTTGTTTTATGCTATGCCGGTCAGGCTGCATATATCTCCCGGAATTTAGGTGCTAGAGATTTCAACCATTTTAGTCAATCTATGCCACGTAAGTTGGATGGAATGTACCGTAGAAATTTAGGTGCAATTAACTACCTGAATTTCTACCATATATATTTTGATCTGTTTTTGAAAATTCAGTATTTGGGTGAAGTGATATATATAGTTTGGTGTGGTGATCCCTTGGCAGGTCATTATTGCAAACATGTGTTCATAATATTATCCCCACTTGCTTCAGCAGTAGGAAGCCAGGCAACCATKACAGCGAGTTTCTCCATCATCAAACAGTGCTTGGCATTAAACTGCTTTCCCAGAGTGAAAGTGATTCACACATCAAAAACAATACACGGCCAGATTTACATTCCTGATGTCAACTGGCTACTGATGATTCTWAGTCTCACWGTCACAATTAGTTTCAGAGACATGGTGAAGATTGGCTATGCAGCAGGTTTGGCTATAATTTGCGGAATGCTTGTAACAACTAGTCTCATGTCACTTATCATCTCATTGTGTTGGGAGAAGAACTTGAGCGTATCCGCGTGCTTCCTGCTATGCTTTGGTTTTGTTGAGGCGGTGTATCTCTCTGCTTGTCTGCTACAGATTCACAAGGGAGCCTGGTATCTGCTTGTTCTTTTGACAATWACAATGACAATCATGCTCTCGTGGCACTATGGAACTGTCAAGAAGTATGAGTTTGATATGCAAAACAAGGTCTCAACAGAATGGCTCGTAGATGTGAGTCCGGGRCTCGGGATCGCCAGGGTGCCTGGGATTGGCTTTATCTACACCGACATTGTAGCAGGAATCCCGGCTTTCTTCTCACACTTCATTACTAATCTTCCCGCWTTCCATCAAGTCCTGATCATGGTATCWTTCAAGTCTATGCCGGTGCCTTATGTCTCCGAAGGCGAAAGGTATCTCATAGGRCGGATTGGCCCAAAAGATTACAAGATTTACCGCTGCATCGTCAGATATGGATACTGCGATCACATCAGGGATACTGGCGACTTTGAGGAGCACATCATTCGTTCCATAGGGGAATTCATTTCCATTGAGGAGAGAGATATTGAATCCGTGGATGCRGCCAKCGCCACAAATGAAAGAATGATTGTTGTAGGGAATTCTTCAACAACGCATGGACATAACAATGCTCTAGTTCCTCTGGATGCATATGAGGGTCCAGCGGTGAACAATGAATCTCAGATCAGTCCAGTTCCTGACACGGAGMGTACAAGCAAGAAGAAGCGAAAGAAGGTTCGGTTCATGCTGCCTGTTAATAGTCCTAAAATAATGCAGCCATGTGTGAGGAAGGAACTTTTGGACCTAATTGATGCCAGGGAGAGCGGTAGTGCCTATTTCTTGGGCCAATCGCACCTAGTGGTGCGTGACGGCTCAAACTTTCTCAAGAGATTCTTAATCATGGTGTATCGTTTTAGTGAGAAAAACTGTCGAGAGCCTCCCGTAGCTCTCAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGTATGGTATGTACTATATAG 2538 0.4283 MMDLPPPLCPDDEIFREKVQKKKTWKQEILLSFQIVGVVYGQLSTAPLYVFGTMDAKALASEEVVYELFSFIFWTLTMISLLKYASIVLKADDKGEGGTFALYSLLCRNAKVGLLPSDRSANQIMNCEGRTPSKIRARRVIEKSKICHYLLLFLALFGSCMAIGDAVLTPALSVFSASTGVQRSLSDIIADMYPSSRRARESDTVSNALHRYVTVPAACAILVGLFMLQNCGTRKIGFMFAPIISAWLLFIGVVGIYNIFHWDVKIIYKISPVYVFKFIRNFNYHRWKLLGSIILCVGGSEAMFADLGHFSKKSIKITFICLIYPILVLCYAGQAAYISRNLGARDFNHFSQSMPRKLDGMYRRNLGAINYLNFYHIYFDLFLKIQYLGEVIYIVWCGDPLAGHYCKHVFIILSPLASAVGSQATXTASFSIIKQCLALNCFPRVKVIHTSKTIHGQIYIPDVNWLLMILSLTVTISFRDMVKIGYAAGLAIICGMLVTTSLMSLIISLCWEKNLSVSACFLLCFGFVEAVYLSACLLQIHKGAWYLLVLLTITMTIMLSWHYGTVKKYEFDMQNKVSTEWLVDVSPGLGIARVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLIMVSFKSMPVPYVSEGERYLIGRIGPKDYKIYRCIVRYGYCDHIRDTGDFEEHIIRSIGEFISIEERDIESVDAAXATNERMIVVGNSSTTHGHNNALVPLDAYEGPAVNNESQISPVPDTEXTSKKKRKKVRFMLPVNSPKIMQPCVRKELLDLIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGMVCTI* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5028 845 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 362 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5028 845 Pfam K+ potassium transporter 407 667 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5028 845 Pfam K+ potassium transporter 33 356 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g5028 845 PANTHER POTASSIUM TRANSPORTER 22 362 - -
Amo13g5028 845 PANTHER POTASSIUM TRANSPORTER 404 844 - -
Amo13g5028 845 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 404 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5028 Amo-Chr13 149574796 149578639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5028 21 845 Inorganic Solute Cotransporters AT1G70300 44.156 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5028 K03549 K12236 gmx:100801073 1211.44