Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5018 ATGGGTGGTGGTGGTGGTGGAACGCTCGTGGAAGGGATTCGACGCTTATTCCAAAGACGTGCTTCTTCAGCTATTAAAGGGGACGATCGTATTATTATCGATAATAATAATAATAATAATAATAATAACAATAATAATAATAATAGGAGCGATGTGTTGTTGGTGAGAGATTTGCGGGCACAATTGGCCTCTATTCCCACTAGCAATCAAGAAACTGAACTCACCATTGACGATGACTTTGATATCTCTGGATTGAAGCCCCTCAAAGTCCCTACCCAGATCTTCTTCAAACACTCTTCCATGGATCCCCACAAAAAGGGTTCTGCAGAAGCTGAGTTTTTTACTGAGTATGGAGAGGCAAGCCGATACCAAATCCACGAAGTCATCGGGAAAGGAAGTTATGGCGTCGTGGGCTCTGCCCTTGACACTCATACCGGGGAAAAAGTTGCAATCAAGAAAATCAATGATGTTTTTGAACATGTATCGGATGCTACAAGAATCCTAAGAGAAATTAAGCTCCTGCGCTTACTTCGCCATCCTGATATAGTAGAAATTAAACATATTATGCTTCCTCCTTCCCGTCGAGAGTTCAAGGATATCTACGTTGTCTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCAAATGATGATCTTACACCTGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATATATACATACAGCAAATGTTTTTCATCGTGACTTAAAGCCCAAAAATATTCTTGCCAATGCTGATTGCAAACTAAAGATATGTGATTTTGGACTTGCTCGAGTTATTTTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGGGCACCTGAATTSTGTGGTTCTTTTTTCTCTAAATATACCCCTGCAATTGATATCTGGAGCATTGGATGCATATTTGCAGAAATGCTCAATGGAAAGCCATTGTTTRRGGGTAAAAATGTGGTGCACCAATTGGATCTCATGACCGATTTGCTTGGCAGTCCTCCACCTGAGTCCATTGCAAGGATTCGAAATGAGAAAGCTAGAAGATATCTTAGTGGCATGCGAAAGAAGCAACGAGTTCCGTTATCTCAAAAATTTCCAACTTCAGATCCATTGGCTCTTCGATTACTGGAGCGCTTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCTTTAGCCGATCCTTATTTTCGAGGCTTGTCGAATGTGGATCGTGAGCCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTCCAGGAATATCTTCGTGGAGGAGAACAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAGGGTGAGCGAAGCACTCCATTGCAGAGACAGCATGCCTCCTTACCCAGGCAAGTAGAGCGAGTTTGTGTTCCAAAGGATGAGAAAAACAAAAATGATGAAAGACCCAGCGGTTCAAATTTGTCTAATCCTCGAGAGTCTGATGCTGCTGGAAACACCAATGCAGAAAATGGGCCCTCAAAGCCAAACAACAGCACACGTTGCCTCTTGAAAAGTGCCAGCATTAGCGGTTCAAGGAGTTATGAGAAACCAAGTAAAGAACCAGAGGAGGAACCAATCGCGGAGGTCAATGAGGATATGGTAGATGGATTGACAGAGAAAGTTGCTGCTATAAATGTTTAG 1827 0.422 MGGGGGGTLVEGIRRLFQRRASSAIKGDDRIIIDNNNNNNNNNNNNNNRSDVLLVRDLRAQLASIPTSNQETELTIDDDFDISGLKPLKVPTQIFFKHSSMDPHKKGSAEAEFFTEYGEASRYQIHEVIGKGSYGVVGSALDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVIFNDAPSAIFWTDYVATRWYRAPEXCGSFFSKYTPAIDIWSIGCIFAEMLNGKPLFXGKNVVHQLDLMTDLLGSPPPESIARIRNEKARRYLSGMRKKQRVPLSQKFPTSDPLALRLLERLLAFDPKDRPTAEEALADPYFRGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRQVERVCVPKDEKNKNDERPSGSNLSNPRESDAAGNTNAENGPSKPNNSTRCLLKSASISGSRSYEKPSKEPEEEPIAEVNEDMVDGLTEKVAAINV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5018 608 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 82 543 - -
Amo13g5018 608 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 82 543 - -
Amo13g5018 608 ProSiteProfiles Protein kinase domain profile. 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5018 608 SMART serkin_6 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5018 608 Pfam Protein kinase domain 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g5018 608 MobiDBLite consensus disorder prediction 531 576 - -
Amo13g5018 608 MobiDBLite consensus disorder prediction 516 530 - -
Amo13g5018 608 CDD STKc_TDY_MAPK 122 459 - -
Amo13g5018 608 ProSitePatterns MAP kinase signature. 158 261 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo13g5018 608 Gene3D Phosphorylase Kinase; domain 1 139 460 - -
Amo13g5018 608 MobiDBLite consensus disorder prediction 491 608 - -
Amo13g5018 608 ProSitePatterns Protein kinases ATP-binding region signature. 129 153 IPR017441 GO:0005524
Amo13g5018 608 SUPERFAMILY Protein kinase-like (PK-like) 119 419 IPR011009 -
Amo13g5018 608 Gene3D Transferase(Phosphotransferase) domain 1 209 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5018 Amo-Chr13 149419148 149422701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5018 110 608 MAP Kinase Gene Family AT3G18040 79.842 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo13g5018 Pkinase 9.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5018 - - gmx:100780831 925.62