Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4989 ATGGCATTTGCTATAGACTTGAACACGCAGCCGTCATCAGAAGAAATTCACTCATTTGATACCCATATTGATATGGACGATATAAATATTTGTAATAGCTCAAGCAATTCTGCTACAGAAACTGAGTGCACGACTGAGGTCATAATTCATCCCACTATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCCACAAGAATGGAAAAACACCCATTAACCAATCCATACAGTGTAATAGAGATGGATACCGAACAAAGAAGAATCCGGTAACCCATAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCGCATCTATGTGAAACTTGACATAGAGCTTGAAAAATGGATACTGTCGAAGGTAGAATTAACTCACACGCATCGATGTGATCCCAGTTTGTCATGGATGTTTAAGAAAAACAGGGAACTCACCATGCACGTTAAGGATGTCATTGAACGCAACGACCAGGCTGGTATACGACCTTCGAAGACTTTTTAG 588 0.4048 MAFAIDLNTQPSSEEIHSFDTHIDMDDINICNSSSNSATETECTTEVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFHKNGKTPINQSIQCNRDGYRTKKNPVTHRSNTVSSVHCKARIYVKLDIELEKWILSKVELTHTHRCDPSLSWMFKKNRELTMHVKDVIERNDQAGIRPSKTF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4989 195 Pfam FAR1 DNA-binding domain 73 160 IPR004330 -
Amo13g4989 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4989 Amo-Chr13 148889228 148890098 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g4989 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4989 - - ahf:112779187 389.808