Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4962 ATGAGTGGCTTTTGCACTGGTGCTAAAATAGAGATCTTCAAGTGCATGAGAAAACAACTGACCGTGGCAAAGGATACCAGACGTGTGGACATACTTTGTTACCGTGTCTCCTTATGCCAAAGACTTCTTCAAGGGACTAAAATGTATCAAAAGCTTTATGAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGACGTGCGTCCATTGACCAGCTCACCAGCAAAGATTGGTAGGGAGATTGTGAATAGGCTTTCATTTGGACCAGGGGTTCAGAAACTCTGTGGATCTGCTCTGGAATCTCTTGGTTCACTACTTTTGAAAAGGATCTCACATATATCACTTAATCTAACTACTCAAGTTGATCAATTAACACCTAACGATGTAAAAATGCTTGCTCCAAGCATGGTGAGGTTTGAAGACATCACTGCAACATCCCTTGCTATTATTTTGGGATATGAAAATCATGGAGAAAATATTTCTGGTTTCACCTTGTGGCATCGCAAAGCTGATGATGAGGACTACGCAGTGGACCCTACTTGCACTTTGCTTCTTCCAAATAGAAGGTTCAGTGTCAGAGATCTTATTCCTGCTATAGAATACACTTTCAAAGTTGTTTCTAATGACTCGAGGGAGTCGGGCATGTGTGAAGTTCATATCTCAACAGAGCATAGTGATGATGAAGCCCCTAACTGCTCGGCAACGGAAAGAAGCCAGAGCCCAGTAATCAACTGCAGCAGCCTTCCCAATCCATCTTCAGTGGAAGATGAAACTAATAACAGCAATCCATATAGTGACCAGACTGATAATCGCTCAGAAAATTATCATAATTATTGCAAGGATTCTCATCAAGTTGCTACTGGAAATTTATCAAATGCCACAAGTTTAGTTGCTTAG 897 0.4103 MSGFCTGAKIEIFKCMRKQLTVAKDTRRVDILCYRVSLCQRLLQGTKMYQKLYEIVDEAVKKLEPDVRPLTSSPAKIGREIVNRLSFGPGVQKLCGSALESLGSLLLKRISHISLNLTTQVDQLTPNDVKMLAPSMVRFEDITATSLAIILGYENHGENISGFTLWHRKADDEDYAVDPTCTLLLPNRRFSVRDLIPAIEYTFKVVSNDSRESGMCEVHISTEHSDDEAPNCSATERSQSPVINCSSLPNPSSVEDETNNSNPYSDQTDNRSENYHNYCKDSHQVATGNLSNATSLVA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4962 298 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 292 - -
Amo13g4962 298 MobiDBLite consensus disorder prediction 232 272 - -
Amo13g4962 298 CDD FN3 133 213 IPR003961 GO:0005515
Amo13g4962 298 Gene3D Immunoglobulins 130 230 IPR013783 -
Amo13g4962 298 MobiDBLite consensus disorder prediction 222 275 - -
Amo13g4962 298 PANTHER VIN3-LIKE PROTEIN 2-RELATED 11 292 IPR044514 GO:0010048|GO:0040029
Amo13g4962 298 SUPERFAMILY Fibronectin type III 125 210 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4962 Amo-Chr13 148664851 148666943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4962 7 272 PHD Gene Family AT4G30200 46.154 6.25e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4962 - - ahf:112792034 546.584