Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4959 ATGGTTACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTGTGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGGCCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAGGCCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTGAAGTTTAAGACTGATCCTGAAGGTTTTGCACGAGTTGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAAAACGTGATCATGAAGCCGGTCGAGTTCCTCCTCGGAAGGGCTATAACACCGCATGATGTGGCTAGCATGGTGGTCAGGTGTCCGCAGTTAGTAGCACTGAGAGTGGAGCTCATGAAGAACAGTTTTTACTTCTTTAAGAGTGAGATGGGAAGACCACTGAAAGAGCTTGTAGAGTTCCCTGAATACTTTACTTACAGTCTGGAGTCTAGGGTCAAACCAAGATACCAAAGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGGTTGCAGGGTAATTATATTGAGACTGAAAGTATAGGTCCGACATTTTTAATGGGTGGGAAATTGAACCTGCCAGGGAATGCAATTCTTTCAGATGAGGAAGAGGAGAGTGATGATGAAGTACTATACCGAAGAACTGTTTCTTTATAG 816 0.435 MVTQYPYFLGMRVGTVIKPFIDYLVSLGLPKKILAKMLEKRAYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKAKLSSQQYFFSLKFKTDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAITPHDVASMVVRCPQLVALRVELMKNSFYFFKSEMGRPLKELVEFPEYFTYSLESRVKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESIGPTFLMGGKLNLPGNAILSDEEEESDDEVLYRRTVSL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4959 271 Pfam mTERF 1 221 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 PANTHER EXPRESSED PROTEIN 1 254 - -
Amo13g4959 271 PANTHER CGI-12 PROTEIN-RELATED 1 254 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 Gene3D Transcription termination factor 3, mitochondrial 1 231 IPR038538 -
Amo13g4959 271 SMART mt_12 108 138 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 SMART mt_12 35 66 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 SMART mt_12 71 103 IPR003690 GO:0003690|GO:0006355
Amo13g4959 271 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4959 Amo-Chr13 148616073 148617665 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo13g4959 mTERF 4.6e-77 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4959 K15032 - gmx:100809590 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4959 13 148616073 148617665 Amo05g3478 05 97818776 97825376 PCT