Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4946 ATGGCTCATCAGCACCATGTTGTGTTGCTGGCGGTGATGATCATCATGCTCTCCGCCATGGCTGACACCGACTCATTCATATTCGGAGGATGCTCTCAGGTGAAGTTCATGCCGGGTTCACCCTACGAGAACACCGTAAACTCCCTCTTAACCTCGCTCATCAACTCAGCCACCTTCACCAACTACAACAACTTCACCATTCAGCCAACTCCCTCTTCCTCCTCCACCGTCTACGGCCTCTACCAGTGCCGCGGCGACCTCTCCAACGACCGCTGCTCCCGCTGCGTGGAGCGTGCCGTCAGTCAGCTGGGCACGCTCTGCCTGGACGCATGCGGCGGCGCGTTGCAGCTGGACGGATGCTTTGTCAAGTACGATAATGTCAGCTTCTTGGGAGTGGAAGACAAGACTGCGGTGATGAAGAAATGTGGACCGTCCATTGGGTTGACCTCCGATGCGATGACCAGGCGGGATGAGGTGCTGGCGTATTTGGAGACGTCAGATGGGAGCACCTATAAGACGTACAGGACGAGTGGGTCGGGGAATGCGCGGGGTGTGGCACAGTGCACGGGAGACCTCAGCCCAAGCGAGTGTCAGGATTGCCTCTCTGATGCAATCCAACGGTTGAAAATGGAGTGCGGAGCATCCACGTGGGGTGACATGTATCTCGCCAAGTGCTACGCGCGATACTCGGAAGGTGGCAGGTACTCGCGCAACAGTAACGATGATAGCAATCACAATGATGATGAAATTGAGAAGACACTAGCCATCCTAATTGGTCTCATAGCTGGTGTTGCTCTAATAATCGTTTTCCTTTCCTTCTTGTCCAAGGTCTGCGAAAAGCACAAAGGTGGTAAATAA 858 0.5431 MAHQHHVVLLAVMIIMLSAMADTDSFIFGGCSQVKFMPGSPYENTVNSLLTSLINSATFTNYNNFTIQPTPSSSSTVYGLYQCRGDLSNDRCSRCVERAVSQLGTLCLDACGGALQLDGCFVKYDNVSFLGVEDKTAVMKKCGPSIGLTSDAMTRRDEVLAYLETSDGSTYKTYRTSGSGNARGVAQCTGDLSPSECQDCLSDAIQRLKMECGASTWGDMYLAKCYARYSEGGRYSRNSNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4946 285 ProSiteProfiles Gnk2-homologous domain profile. 134 234 IPR002902 -
Amo13g4946 285 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 7 282 - -
Amo13g4946 285 Pfam Salt stress response/antifungal 157 230 IPR002902 -
Amo13g4946 285 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Amo13g4946 285 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 282 - -
Amo13g4946 285 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Amo13g4946 285 Gene3D - 148 232 IPR038408 -
Amo13g4946 285 Gene3D - 23 129 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4946 Amo-Chr13 148499094 148501226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4946 5 229 Pollen Coat Proteome AT4G20670 23.967 2.87e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4946 - - adu:107481466 550.436