Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4909 ATGTCTACCGAGAAGGAGAGAGAGACTCAGGTTTACCTAGCCAAGCTTTCTGAGCAGGCTGAAAGATATGAAGAGATGGTAGAATGCATGAAGACAGTGGCAAAGCTGGATCTGGAACTGACAGTGGAAGAGAGGAACCTGCTGTCAGTGGGATACAAGAACGTGATTGGTGCAAGAAGAGCTTCATGGCGCATCATGTCTTCAATCGAACAGAAGGAAGAGTCAAAGGGGAATGAGGCCAACGTCAAAATCATCAAGGGTTACCGCCAAAAGGTGGAGGAGGAGCTTTCCAAGATCTGCAGTGATATTCTCGACATCATTGACCACCATCTCATTCCTTCTTCCCACTCTGGAGAAGCCACTGTTTTCTACTACAAGATGAAAGGTGACTACTATCGTTACCTTGCTGAGTTCAAGACTGAGCAAGAAAGGAAAGAGATAGCTGAACAGTCACTCAAGGCATACGAGGCTGCTTCAGCAACTGCAAACTCAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTGTTTTATTATGAGATCATGAACTCTCCTGAAAGGGCTTGCCATTTGGCAAAACAAGCATTTGATGAGGCAATTGCGGAGTTAGACACATTGAGTGAAGAGTCATACAAAGACAGCACTTTGATCATGCAATTGTTGAGAGACAATCTCACTCTCTGGACCTCCGATTTGCCTGAGGATGGAGGTGAAGAATTCAAACCAGTAGAAGAAGCATCAAAACCTACCGAACCTGAGTCCTAA 783 0.4521 MSTEKERETQVYLAKLSEQAERYEEMVECMKTVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEANVKIIKGYRQKVEEELSKICSDILDIIDHHLIPSSHSGEATVFYYKMKGDYYRYLAEFKTEQERKEIAEQSLKAYEAASATANSDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEEFKPVEEASKPTEPES* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4909 260 PANTHER 14-3-3 PROTEIN 3 255 IPR000308 -
Amo13g4909 260 Coils Coil 13 33 - -
Amo13g4909 260 MobiDBLite consensus disorder prediction 240 260 - -
Amo13g4909 260 Gene3D - 1 246 IPR036815 -
Amo13g4909 260 Coils Coil 138 158 - -
Amo13g4909 260 Coils Coil 195 215 - -
Amo13g4909 260 MobiDBLite consensus disorder prediction 237 260 - -
Amo13g4909 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Amo13g4909 260 Pfam 14-3-3 protein 13 235 IPR023410 -
Amo13g4909 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Amo13g4909 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Amo13g4909 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Amo13g4909 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Amo13g4909 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Amo13g4909 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Amo13g4909 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Amo13g4909 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Amo13g4909 260 PANTHER BNAC03G57490D PROTEIN 3 255 - -
Amo13g4909 260 PIRSF 14-3-3 1 247 IPR000308 -
Amo13g4909 260 SMART 1433_4 7 248 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4909 Amo-Chr13 148077559 148080792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4909 2 254 14-3-3 family AT1G26480 84.585 2.51e-160 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4909 - K06630 vvi:100254211 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4909 13 148077559 148080792 Amo13g4909 13 148077559 148080792 ECH