Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4902 ATGGAACCCTGCCAAAAGCCTCCGCCGCCACCAGAACAATCCGACGCCTCTTATTTTTTCTCCGCCGTCACCGACAGCACCAACATGCTCGCCGACTTTGACTGGATCGGAGGAGAAGAAGGCGACACCATSTGYCTGCCGCCGGAGAACAACAGCAACAACAATAATCAATCGCCGTCTTCAAGCTCAGCTGAGGATCCGCCGGAGAGTTCGATCGCCTCCGACGGGAAACAGCTCGACAAAGAGAAACCACCGAGTAGAAGTAAGAAGAAGCAGAAACGAATGAAGCAGCCACGGTTTGCTTTTATGACTAAGAGTGAAACCGATCATCTTGAAGATGGCTACAGATGGCGAAAGTACGGCCAGAAGGCAGTTAAAAATAGTCCATTCCCCAGGAGCTACTATCGTTGCACAAACAACAACTGCAGTGTGAAGAAAAGGGTGGAACGCTCCTCGGAGGACCCAACTATTGTGATAACCACATATGAAGGCCAACACTGCCACCACTCCGTAGGGACATTCCACCACCACCGACAACTAAGTGGCATGCTTAGTAGTAATCAAAAATCCACATTTGCAACTCAATTTTCCCTTGGAAATATGTCACACTTCTATTATCCAATTGATCAATTACCTGAAGAAAACACACTTATTAGTAGTAGTGTTTCTGATGATCCTTATTGTCACTCACACAATAATGATAATTACAATGGAAGATGCAGCATTACATTGGCAGATTCATCAACCCCAGAAGAGCTACCCACAGATGATGGACTACTTGGAGATATTCTTCTGCCTAGGCAAATGCGTAACGGATGA 819 0.464 MEPCQKPPPPPEQSDASYFFSAVTDSTNMLADFDWIGGEEGDTXCLPPENNSNNNNQSPSSSSAEDPPESSIASDGKQLDKEKPPSRSKKKQKRMKQPRFAFMTKSETDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNNNCSVKKRVERSSEDPTIVITTYEGQHCHHSVGTFHHHRQLSGMLSSNQKSTFATQFSLGNMSHFYYPIDQLPEENTLISSSVSDDPYCHSHNNDNYNGRCSITLADSSTPEELPTDDGLLGDILLPRQMRNG* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4902 272 SUPERFAMILY WRKY DNA-binding domain 103 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo13g4902 272 Pfam WRKY DNA -binding domain 112 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo13g4902 272 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 42 231 - -
Amo13g4902 272 MobiDBLite consensus disorder prediction 1 101 - -
Amo13g4902 272 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 231 IPR044810 GO:0003700
Amo13g4902 272 MobiDBLite consensus disorder prediction 46 69 - -
Amo13g4902 272 Gene3D WRKY domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo13g4902 272 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo13g4902 272 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4902 Amo-Chr13 147958038 147967121 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4902 54 271 WRKY Transcription Factor Family AT1G69310 49.541 1.06e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo13g4902 WRKY 5.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4902 - - lang:109359112 215.698