Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4864 ATGGCTTCAACAAAGTTGCCTTCAGGTGCAAGCAAGAAGTTCAAGCCTACAGATGAAGAACTCATTCAAGATTTTCTTCTTAACAAAATCAATGGGAGGCCTCTACCAAACAATGGAACCATTCTTGAAGAAAACGTTGAAAATTCTTATGACGGGAAGGACCTCTATTTTTTCACTACTCTGAAAAGGAAGTTCTCAACTAACAGCTTGCGGATGGTTCGCACCATTGGGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGCGCATTGGAATGAGGAAACGATATCGCTTTGAGAAGAGTGGTACTAGCCATGATGGTGGATGGATCTTGCATCAATATAGCATTGATTCTTCTTTGTTACCAAATCCATCCAATGTAAGTATCATAATTTTGCGCATATTCTTTAACCAGAGGTTTCGAATTTGA 456 0.3969 MASTKLPSGASKKFKPTDEELIQDFLLNKINGRPLPNNGTILEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEGEDIGKEIMANKTNQRIGMRKRYRFEKSGTSHDGGWILHQYSIDSSLLPNPSNVSIIILRIFFNQRFRI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4864 151 Gene3D NAC domain 17 149 IPR036093 GO:0003677|GO:0006355
Amo13g4864 151 ProSiteProfiles NAC domain profile. 8 146 IPR003441 GO:0003677|GO:0006355
Amo13g4864 151 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 127 - -
Amo13g4864 151 Pfam No apical meristem (NAM) protein 13 125 IPR003441 GO:0003677|GO:0006355
Amo13g4864 151 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 127 - -
Amo13g4864 151 SUPERFAMILY NAC domain 12 135 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4864 Amo-Chr13 147378937 147379437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4864 5 148 NAC Transcription Factor Family AT5G13180 32.692 8.14e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo13g4864 NAM 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4864 - - ahf:112730219 269.626