Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4863 ATGGCTGAATCAACGGCGAGCACGCAGAGCAGCAGCAGCAGCAGCAACAACAACCACCGGACCGAAGAACAGGACGATGACTACATGGGTGACCTCTCACGCTTCCTTCCGTCTGAGACTCTTCCAAAACCTTCATCCAAGAAGATCTCTGGCAAGAAAGACCCTCCGATCAGCTCTTCCAAGAATAAGTTAAAAACACTCAGCTGGCAAGAACGGCGAAAACTTGAAAGAGAAAGAAAACAGAAAGAAGAGGATGAGCAAACATTGGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAAATGGGTTATACGCCCGGTGCTGCCCTTGGCAAAGAGGGTTTGGGTAGGGCTGAGCCAGTGGGGATTGAGATTCGACGATCGCGAGCTGGTATTGGCCTAGATGATCCTCACAAGGAGAAGAGGAAAAAGGAGGAAATCATCGCTGAGAGAAAAAGGAGGAAAGAGGAGGATCTAATGCAAGACTTTGGGTTGAGACAGAAGTCGCGATGGCAGAGTAAGAGAGTTGTAGCCAATTTCCATAAGGCAAAGGTTGCCCTTGATCAATTAGAGAATAGAGAAATCATTGAACCGGAAAAGAATGAGGATGATGAAGAAAAGGAAGATGAGGAAGAGGAAGAAATAACAGAAGAGGATTTGCAAGAAGTTTTGATGAAACTGAGGGATGACCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGCTCTCTTGACCAACTGCCCTGGAACCAATGAAGATGATCACTGA 801 0.4582 MAESTASTQSSSSSSNNNHRTEEQDDDYMGDLSRFLPSETLPKPSSKKISGKKDPPISSSKNKLKTLSWQERRKLERERKQKEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGAALGKEGLGRAEPVGIEIRRSRAGIGLDDPHKEKRKKEEIIAERKRRKEEDLMQDFGLRQKSRWQSKRVVANFHKAKVALDQLENREIIEPEKNEDDEEKEDEEEEEITEEDLQEVLMKLRDDHNYCLFCGCKYESKDALLTNCPGTNEDDH* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4863 266 Pfam G-patch domain 98 141 IPR000467 GO:0003676
Amo13g4863 266 MobiDBLite consensus disorder prediction 1 94 - -
Amo13g4863 266 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 24 266 - -
Amo13g4863 266 Coils Coil 208 237 - -
Amo13g4863 266 Coils Coil 72 92 - -
Amo13g4863 266 SMART DUF4187_2 211 266 IPR025239 -
Amo13g4863 266 PANTHER UNCHARACTERIZED 24 266 IPR039249 -
Amo13g4863 266 MobiDBLite consensus disorder prediction 136 155 - -
Amo13g4863 266 MobiDBLite consensus disorder prediction 1 18 - -
Amo13g4863 266 MobiDBLite consensus disorder prediction 205 225 - -
Amo13g4863 266 SMART G-patch_5 96 142 IPR000467 GO:0003676
Amo13g4863 266 MobiDBLite consensus disorder prediction 66 90 - -
Amo13g4863 266 MobiDBLite consensus disorder prediction 198 225 - -
Amo13g4863 266 ProSiteProfiles G-patch domain profile. 98 144 IPR000467 GO:0003676
Amo13g4863 266 Pfam Domain of unknown function (DUF4187) 214 266 IPR025239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4863 Amo-Chr13 147372884 147375698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4863 90 140 C2H2 Transcription Factor Family AT5G26610 43.137 2.79e-06 45.8