Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4849 ATGATGCTTATCTACTCATCATTCTCACTATCCTCAGGTGCATGGTCATTCATTTTTGAGAACAACTCCAATTACAAGACTATTACTATTATCACATGGAGAGCCAAAATTCAGGAGAATCCCTTAGAGGAGGAACATCCTTCTTCAAAACATGTTTCAATGGACTTAATGCCTTGTCAGGTAGTCAGTCTATGGTATCAAATCATGTTTGTGCCAATGATATTAATTATTCTAATCTCTTCTCTTTCGATCTTTTCCTTATTAGGTGTTGGGATACTCTCAATGCCATATGCAGTGTCTCAAGGAGGGTGGATGAGTTTAATTTTGCTCCTCATTGTTGCTACTGTGTGTTGGTACACAGGATTGCTTCTTCAAAGGTGCATGGACGCACATCCATTAATCAAATCCTACCCTGACATAGGCGAGGTTGCTTTCGGTTACAAAGGAAGAACCATGGTAGCCATCTTCATGTACTTAGAGCTCTATTTAGTTGCGGTAGAGTTTCTCATACTAGAAGGTGACAATCTTGAAAAGTTGTTTCCAAACATGGATTTCAAGATTGGTAGCCTTAGAATTGGAGGCAAAGCCGGTTTTGTGTTGCTAACTGCGCTCGCAATACTACCCACAACATGGTTGAAAAGTTTGGGAGTTCTGGCCTACATTTCTATTGGTGGGGTTGTGGCTTCTCTTATTTTGATTGTTTGTGTTGTGTGTGTTGCTGAAGTTGATGGAGTTGGATTTCATCAAAAAGGAGACATCATTAATTGGAAAGGGTTGCCTTCTTCTGTGAGTCTCTTTGCGTTCTGTTATTGTGGACATGCTGTCTTTCCTACATTGCGTAATTCCATGAAAGATAGAACTCAATTTTACAAGGTTTTGATAATATGTTTCATCACAAGCACTATAACCTATGGGTCCATGGCTACCATAGGGTACAAGATGTTTGGAGAACACGTGAATTCGCAGGTGACCTTAAATCTTCCAACAAAGAAAATAAGCACCAAGATAGCAATTTACACAACATTAATCAACCCTTTCACTAAGTATGCTGTTATAATCACCCCAATAGCCAATGCTGTTGAAGAAACATTATTTTTGTACAAGGGTAGACCTATTGCCATCCTCATCAGAACCACTATTGTGCTAAGCACTTTGCTTGTGGCATTATTTGTTCCCTTTTTCGGCTATGTTATGGCATTTATCGGCGCATTTTTGAGTGTCACGTGTTCATGGATTCTGCCATGCTTGTGCTACTTAAAGATGAACAAAGCAGCTCAAAAGTTTGGAATAGAATTGGTTATCATTATAGGAATTTTGTTTACAGGGTCAATTATTGCTCTACTTGGCACTTATATCTCTGTAACTCAGATAGTAAGTCATATCAAATTATGA 1392 0.3872 MMLIYSSFSLSSGAWSFIFENNSNYKTITIITWRAKIQENPLEEEHPSSKHVSMDLMPCQVVSLWYQIMFVPMILIILISSLSIFSLLGVGILSMPYAVSQGGWMSLILLLIVATVCWYTGLLLQRCMDAHPLIKSYPDIGEVAFGYKGRTMVAIFMYLELYLVAVEFLILEGDNLEKLFPNMDFKIGSLRIGGKAGFVLLTALAILPTTWLKSLGVLAYISIGGVVASLILIVCVVCVAEVDGVGFHQKGDIINWKGLPSSVSLFAFCYCGHAVFPTLRNSMKDRTQFYKVLIICFITSTITYGSMATIGYKMFGEHVNSQVTLNLPTKKISTKIAIYTTLINPFTKYAVIITPIANAVEETLFLYKGRPIAILIRTTIVLSTLLVALFVPFFGYVMAFIGAFLSVTCSWILPCLCYLKMNKAAQKFGIELVIIIGILFTGSIIALLGTYISVTQIVSHIKL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4849 463 PANTHER OS05G0424000 PROTEIN-RELATED 86 459 - -
Amo13g4849 463 PANTHER OS06G0228500 PROTEIN 86 459 - -
Amo13g4849 463 Pfam Transmembrane amino acid transporter protein 84 453 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4849 Amo-Chr13 147098039 147100375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4849 86 461 Amino Acid or Auxin Permease AAAP Family AT3G28960 48.148 2.01e-124 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4849 K15015 - gmx:100812006 545.428