Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4837 ATGCCTCTGTCCATTGAGCTCATCAAGCAACTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAAGTGGCAGGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGGAACAGTGCAAGGCCAAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCCACAGGGACTGACAGGCCTATATACTCCTCAGAGGGTTCAAAGTGCATTGGACTCAAGAAATCTTTGGTCTTCTACAAAGGCAGAGCTGCCAAAGGTGTTAAAACTGATTGGATGATGCATGAGTTTAGGCTCCCTTCTCTTGTTGACTCTTCTTCATCCGACAAGACCACTATTCCTGCTAATGACTCTTGGGCAATCTGCAGAATATTCAAGAAAACAAATGCTACAGCTCAAAGAGCACTCTCTCACTCTTGGGTTTCTACCTTACCTGAAACACCAACCACCACTACCAATGATACAGATCACATATTCCAGTTTTGTTCATCCAACATGCCAGCAATGATGGCAAAGAAAACTAGCTTCATGACCCAGTTTTGCACTAACTACACTAGTGACACACAAATCCAAGATGTTGCATCATCTTATAAACCACCCTTCATTAATATTAATCCATTGCTTTACAAACACTTTGATCATCATCATCATCAGTTACCACCCATTATTTCAAATGGAGATCTTATAAGCAACGACTGTTTAATACCCTCTTCTACTACTACTCCACTTGAAACATCCTCTAATAGTGCAAAACCTACTATGGATTTTTCTTCATTGTTGCTGAACATGTCATCTTCTGTTCTTGGAGATTTTGCTGGAAAGACATCATCGTCGTCGTCATCCCAAGAGGGTACAGCAGCAGCAGCAACAGCAACAACAATCACAAGTAGCTTCGGTGGTGGAATGCAGGAGCACTACCCAACAATACCATTACTGCGTCAGATGCATCAAGGGAACAACAACAACAACAACAACATTGGCATCAACAACAACAACGTGTCTGCTGGCGGTGAAGAACAAGAGTTGGAGAAAGTTGGATCCATTGTTGGGTTCCCATTCATGAACATTGGGGATGCATGGAAGTCAAATATGCTTTGGGATACTTCTTGTCCCTTGTGA 1131 0.4218 MPLSIELIKQLDIYKYDPWDLPKVAGTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLVDSSSSDKTTIPANDSWAICRIFKKTNATAQRALSHSWVSTLPETPTTTTNDTDHIFQFCSSNMPAMMAKKTSFMTQFCTNYTSDTQIQDVASSYKPPFININPLLYKHFDHHHHQLPPIISNGDLISNDCLIPSSTTTPLETSSNSAKPTMDFSSLLLNMSSSVLGDFAGKTSSSSSSQEGTAAAATATTITSSFGGGMQEHYPTIPLLRQMHQGNNNNNNNIGINNNNVSAGGEEQELEKVGSIVGFPFMNIGDAWKSNMLWDTSCPL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4837 376 Gene3D NAC domain 1 136 IPR036093 GO:0003677|GO:0006355
Amo13g4837 376 ProSiteProfiles NAC domain profile. 1 131 IPR003441 GO:0003677|GO:0006355
Amo13g4837 376 Pfam No apical meristem (NAM) protein 3 103 IPR003441 GO:0003677|GO:0006355
Amo13g4837 376 PANTHER PROTEIN FEZ ISOFORM X1 2 374 - -
Amo13g4837 376 SUPERFAMILY NAC domain 2 131 IPR036093 GO:0003677|GO:0006355
Amo13g4837 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4837 Amo-Chr13 146835649 146837449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4837 2 157 NAC Transcription Factor Family AT1G26870 81.250 2.00e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo13g4837 NAM 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4837 - - gmx:100810284 383.259