Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4815 ATGAAAGAGAAAGAAGAAGTGACAAATCAAAAAATGAAGAAACAGGAAGAACAGTGTAACAGAGAATCTAAGAAGAAGGGTCACATTGTAACTTGGACTCAAGAGGAAGATGATATACTGAGAGAGCAGATTGGTATCCATGGAACTGAAAATTGGGCAATTATTGCTTCTAAATTCAAGGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCACCAGAGGAAGACTTGCTCTTATGTGAGGCTCAAAAATTATATGGCAACAGATGGACAGAAATAGCGAAAGTGGTTTCAGGAAGAATGGAAATTGTTGTGAAACATTCAAATCTTATTGAACTTCATTGCTTGTATGCAGAACGGGATAATGCTGTTGAAAAAATCGCTTTCTCTACGCTCTGCAGAGAAGATGGACAAAAATACGAAGCTATAGGCTCAAAGAGAACAGTTCTTCAAGAGTTTTTGAACCGAACCAAAGAAGCAAACAACCCAAAATGCAAGATTCAAGACTTGAGTAGTAATGAGGGAGGCCAGCCATGTTGGAGGCAAATGGATCTGTATGAAGACTCTCCAGCCAGTTCTGAATACAGTACAGGATCAACTATCCTCCCTCTCTCAGCTGGTGACATTATYGAACACTCTTCACACCGGGATATAGAAACTGAAATGAAAACCACACAAATTGAAGATAAGAAAGAAGTAGATGGATGTGAGAGAGGTGTTCTAGTTACTGCAACCCTYGATCAAGATATGCTGCCGAATTCGAAAGAACAAATAAACAATGATAGCGCTGTTTCTGCCTCATCAAGAGTGGAGTTTGGTTCCCCTGTTCAAGTAACTCCGATATTCAGATCTTTGGCTACAGGGATTCCCAGCCCACAATTTTCGGAAAGTGTAAGTTACCCAAACACCTTGGGATTAAACAATTTTAAGACCAACAGAAATACTATCACAGTCCGTTCTGATGCAGATGAAGACATCATCCAAAACATAGGAAAGGAACTTCTTAAGGAAAACACTAGGAGTGGAGTCTCCATCTCTCAACCCAAGTGCTCAAWCATCACAACRGCCACCCTGCAAAAYAGCCCTACTAGACAGTTTACAATCCTAGATCCCAATATCCATAGGCATACCCTTGGCAAGAATGTAATGAGCCTGAGGGACCTGTGTTGTGTTGGTGGCAGATTCATGCTGCACTGCTATGATTGCAGAGCCTTCCTTCATGAGAGGTGCTTGTTGTGCTGTGTGTTGACAAGAGTTATCTTAATTGAGTTAGTTCCATTGGCTGTTGATGGTGGTTGTGAAGTGGAATCCAGAAGGCATTATTACTAA 1368 0.4079 MKEKEEVTNQKMKKQEEQCNRESKKKGHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKLYGNRWTEIAKVVSGRMEIVVKHSNLIELHCLYAERDNAVEKIAFSTLCREDGQKYEAIGSKRTVLQEFLNRTKEANNPKCKIQDLSSNEGGQPCWRQMDLYEDSPASSEYSTGSTILPLSAGDIIEHSSHRDIETEMKTTQIEDKKEVDGCERGVLVTATLDQDMLPNSKEQINNDSAVSASSRVEFGSPVQVTPIFRSLATGIPSPQFSESVSYPNTLGLNNFKTNRNTITVRSDADEDIIQNIGKELLKENTRSGVSISQPKCSXITTATLQNSPTRQFTILDPNIHRHTLGKNVMSLRDLCCVGGRFMLHCYDCRAFLHERCLLCCVLTRVILIELVPLAVDGGCEVESRRHYY* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4815 455 Gene3D - 17 80 - -
Amo13g4815 455 SUPERFAMILY Homeodomain-like 31 120 IPR009057 -
Amo13g4815 455 ProSiteProfiles Myb-like domain profile. 32 75 IPR001005 -
Amo13g4815 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 79 IPR017930 -
Amo13g4815 455 PANTHER TRANSCRIPTION FACTOR MYB88 12 120 - -
Amo13g4815 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 114 IPR017930 -
Amo13g4815 455 PANTHER MYB PROTEIN-RELATED 180 311 - -
Amo13g4815 455 CDD SANT 84 120 IPR001005 -
Amo13g4815 455 Pfam Myb-like DNA-binding domain 32 91 - -
Amo13g4815 455 Gene3D - 83 139 - -
Amo13g4815 455 SMART sant 80 128 IPR001005 -
Amo13g4815 455 SMART sant 28 77 IPR001005 -
Amo13g4815 455 PANTHER TRANSCRIPTION FACTOR MYB88 180 311 - -
Amo13g4815 455 CDD SANT 31 75 IPR001005 -
Amo13g4815 455 ProSiteProfiles Myb-like domain profile. 76 113 IPR001005 -
Amo13g4815 455 MobiDBLite consensus disorder prediction 1 22 - -
Amo13g4815 455 Coils Coil 2 22 - -
Amo13g4815 455 PANTHER MYB PROTEIN-RELATED 12 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4815 Amo-Chr13 146420337 146424904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4815 24 162 MYB Transcription Factor Family AT2G02820 63.309 4.42e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo13g4815 Myb_DNA-bind_6 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4815 K09422 - adu:107489199 277.33