Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4814 ATGGGTAACTGCCTAGATTCCTCAGCAAAAGTGGATGCTGCTCACAGTTCAAGGACTTCCACTTCTGCGAGTCGCTCCTCTGCAGCTTCAAGCTTATCCATCTTGTCACACAATGGAACCAGTGATTCTTCATCTTCATCTGCATCTGCTCTTCCCACGCCGCGCTCGGAGGGCGAAATCTTGTCTTCTCCGAATCTCAAGTCCTTCGCATTCAACGAACTGAAGAGCGCCACAAGGAACTTTCGTCCGGATAGTCTCCTTGGTGAGGGAGGATTTGGCTATGTTTATAAGGGGTGGCTTGATGAACACACTTTTACAGCTTCTAAACCAGGATCAGGAATGGTTGTTGCTGTCAAGAAACTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACTGAAGTTAATTACCTGGGACAACTTCACCATCATAACCTGGTTAAGCTAATTGGCTACTGCGTGGAGGGGGAAGATCGGCTGTTGGTGTATGAGTTCATGCCCAAAGGGAGCTTAGAGAATCATCTGTTTAGAAGAGGACCACAGCCACTTTCTTGGTCACTTAGGATGAAAGTGGCCATTGGTGCTGCCAGAGGTCTAACTTTTCTTCACAATGCCAAATCACAAGTCATATACCGCGATTTTAAAGCTTCGAATATCCTACTAGATGCTGAGTTCAATGCAAAACTCTCTGATTTTGGCTTAGCCAAGGCTGGTCCTACTGGAGATAGAACTCATGTCTCTACTGAAGTTATGGGTACTCGTGGATATGCAGCACCTGAATATGTAGCAACAGGGCGGTTGACAGCCAAAAGTGATGTATATAGCTTTGGGGTTGTATTGCTTGAGCTTTTGTCTGGAAGACGTGCTGTTGATAGAACAAAAGCCGGTGTCGAGCAGGACCTTGTAGACTGGGCAAAACCGTATCTAGGTGACAAAAGAAGACTATTTAGGATTATGGACACCAAGCTTGAGGGTCAATACCCACAGAAAGGAGCCTACATGGCTGCTACTCTTGCTTTAAAATGCCTTGATCGTGAAGCCAAGTTAAGGCCGCCAATGACAGAGGTTTTAGAAACCCTCGAGCAGATAGAAGTCCCCAAAACTGCAGCGCGAAACTCTCAATCAGGGCAGAACAGAGTACATGTTCCTCCAAGCCCAAGGAAGTCTCCTGGACAGAATCTGTCCCCCATGAATGTTACTCGAACTTCATACCCATTGCCGCCTTGCCGAGAATCCCCTCATGTACACTAA 1254 0.4665 MGNCLDSSAKVDAAHSSRTSTSASRSSAASSLSILSHNGTSDSSSSSASALPTPRSEGEILSSPNLKSFAFNELKSATRNFRPDSLLGEGGFGYVYKGWLDEHTFTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHHNLVKLIGYCVEGEDRLLVYEFMPKGSLENHLFRRGPQPLSWSLRMKVAIGAARGLTFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTEVMGTRGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGVEQDLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAYMAATLALKCLDREAKLRPPMTEVLETLEQIEVPKTAARNSQSGQNRVHVPPSPRKSPGQNLSPMNVTRTSYPLPPCRESPHVH* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4814 417 MobiDBLite consensus disorder prediction 367 417 - -
Amo13g4814 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Amo13g4814 417 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 12 415 - -
Amo13g4814 417 Gene3D Transferase(Phosphotransferase) domain 1 167 384 - -
Amo13g4814 417 CDD STKc_IRAK 87 364 - -
Amo13g4814 417 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
Amo13g4814 417 MobiDBLite consensus disorder prediction 367 383 - -
Amo13g4814 417 Pfam Protein tyrosine and serine/threonine kinase 85 361 IPR001245 GO:0004672|GO:0006468
Amo13g4814 417 Gene3D Phosphorylase Kinase; domain 1 57 166 - -
Amo13g4814 417 MobiDBLite consensus disorder prediction 1 61 - -
Amo13g4814 417 PANTHER OS01G0588500 PROTEIN-RELATED 12 415 - -
Amo13g4814 417 SUPERFAMILY Protein kinase-like (PK-like) 52 361 IPR011009 -
Amo13g4814 417 ProSiteProfiles Protein kinase domain profile. 81 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4814 417 MobiDBLite consensus disorder prediction 10 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4814 Amo-Chr13 146392111 146394527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4814 59 361 Glycoside Hydrolase AT3G07070 53.922 1.40e-112 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo13g4814 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4814 - - gmx:100809778 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4814 13 146392111 146394527 Amo13g4814 13 146392111 146394527 ECH