Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4813 ATGTCTCTGAAGCTTGCTGCAGTGACACTTTTGCTGGTGGAAGTGGCAGCCGGTGGAGATACCAGTTTCATCTTTAATGGATTCCAATCATCACAGTATAATCTTACTATTTTAGCTGAGCTCACTTCCAATGGCCTACTCAAACTCACCAATGGTGAGTCCCTGCAAGAAGGACATGCTGTGTATTCATCCCCTGTGGTTTTCAAGAACAGCTCCAACAACGGTAGCGCCTTTTCTTTCTCCACCTCTTTTGTATTTGCCATAAGACCTCAGGCTGCTGAACTCAGTGGTCAAGGTATTATGTTTGTGGTTTATCCAGCAACAAAAAGTCTAACTGGTCTTCCAGCCCAGTACTTTGGTGTCTTCGATAAGAATAGCGTGGGTAACAGCAGCAACCATGTTTTCGGCGTGGAGCTTGATACTTCTATGAGCGCGGAGTTTGAGGATATCAACGACAACCATGTTGGGATTGATATCAATGACTTGAAGTCAGCAGCATCGGCAGTTGCAGGATATCATAACGATGATGGTATTTTCAATGCTTTGAGACTTGCTAGTGGCAACCCTATGCAGGTATGGGTGGAATATGATGGGATGAATAAACACATTAATGTTACTTTGGCACCAATCAACATTGATAAACCAAAACAAGCTTTGCTATCGTTGACCAAAGACCTTTCTCCAATTCTTGAAGAGAATATGTATGTTGGCTTCTCTTCCTCCACGGGTATGGGTACTGCTTCGCAATACATTCTGGGTTGGAGTTTTGAGATCAATGGCCAGTCTCAGCCACTTGAACTATCTCAACTCCCAAAGTTGCCTAGGAAAGGTGATAATAAACATAAAGGGTATAAGAAGGTGGTCTTGGCAGTTGCATTGCCTATGATATCACTCATGTTGGTTCTCTTGGTGACTTTAACAGTTAATCATGTCATCAAAAGGAAGAAGTTTTCTGAGCAACTTGAAGACTGGGAGCAAGAATGTGGTCCTAGTAGATTCAGGTATAAAGATCTCTACTTGGCTACAAAGGGGTTCAGGGAGAAGGAGCTATTAGGAAGGGGCGGATTTGGTAAGGTCTACAAAGGTGTGATAGTGATAGCAGCTTCCAAAGCTGAGATTGCAGTAAAGAGGGTATCCCATGAGTCCAAACAAGGTGTAAGGGAATTTGTGGCAGAAGTTGTGAGCATTGGCCGTCTTCGCCATAGGAATCTGGTTCCCCTTCGAGGATATTGCAGGCGCAAAGGAGAGTTGCTTTTGGTCTATGACTACATGCCAAATGGGAGTTTAGACAAGTATCTCTTTAACAAACCAAAACTGACCCTTAATTGGAGCCAGAGATTTAGAATCATCAAAGGAGTTGCTTCGGCTTTGCTCTATTTGCATGAAGGATGGGAGCAAGTTGTGGTCCATAGAGACATAAAGGCCAGCAATGTGCTACTGGATGCAGAAATGAATGGTAGATTAGGGGACTTTGGTCTTGCAAGGTTGCATGACCATGGAAGCAATCCTCAAACTACTCATGTTGCCGGAACTTTCGGGTATATGGCCCCTGAGCATATCAGAACAGGTAAGGCCACTACAATATCTGATGTATTCGGTTTTGGTGCATTTCTACTTGAGGTTGCTTGCGGAAGAAGGCCCACGGAGAAAACAGAGGAATGGCTTGACAATGCAAATCTTGCTGATTGGGTGTATGATTGCTGGAAGAAAGGTGGGATTCTTGAGGCAAAGGATCAAAATTTGAGCACAGATTCAGAGACAGAGGAGGTGGAATTGGTGCTGAAACTTGGTTTGTTTTGCTCCCAGTCAGAGCCTACGGCTAGGCCGAGCATGCACCAAGTTATGCATTACTTAGAAAGGGAAGTTCCTTTGCCACATTTATCTTTGCTTAGCTTACCTTCCACATTCAGACACCATACTCAAGACTTGCCGAATCCGGCTTCCCCGGATAGGCTGTTGCTCCAGACTTCAGTTGTTGAATCAATTCTCTCAGGTGGTCGATGA 2004 0.4431 MSLKLAAVTLLLVEVAAGGDTSFIFNGFQSSQYNLTILAELTSNGLLKLTNGESLQEGHAVYSSPVVFKNSSNNGSAFSFSTSFVFAIRPQAAELSGQGIMFVVYPATKSLTGLPAQYFGVFDKNSVGNSSNHVFGVELDTSMSAEFEDINDNHVGIDINDLKSAASAVAGYHNDDGIFNALRLASGNPMQVWVEYDGMNKHINVTLAPINIDKPKQALLSLTKDLSPILEENMYVGFSSSTGMGTASQYILGWSFEINGQSQPLELSQLPKLPRKGDNKHKGYKKVVLAVALPMISLMLVLLVTLTVNHVIKRKKFSEQLEDWEQECGPSRFRYKDLYLATKGFREKELLGRGGFGKVYKGVIVIAASKAEIAVKRVSHESKQGVREFVAEVVSIGRLRHRNLVPLRGYCRRKGELLLVYDYMPNGSLDKYLFNKPKLTLNWSQRFRIIKGVASALLYLHEGWEQVVVHRDIKASNVLLDAEMNGRLGDFGLARLHDHGSNPQTTHVAGTFGYMAPEHIRTGKATTISDVFGFGAFLLEVACGRRPTEKTEEWLDNANLADWVYDCWKKGGILEAKDQNLSTDSETEEVELVLKLGLFCSQSEPTARPSMHQVMHYLEREVPLPHLSLLSLPSTFRHHTQDLPNPASPDRLLLQTSVVESILSGGR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4813 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 276 IPR013320 -
Amo13g4813 667 ProSiteProfiles Protein kinase domain profile. 345 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4813 667 CDD STKc_IRAK 351 620 - -
Amo13g4813 667 ProSitePatterns Protein kinases ATP-binding region signature. 351 376 IPR017441 GO:0005524
Amo13g4813 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Amo13g4813 667 PANTHER - 7 640 - -
Amo13g4813 667 Pfam Protein tyrosine and serine/threonine kinase 348 618 IPR001245 GO:0004672|GO:0006468
Amo13g4813 667 Pfam Legume lectin domain 21 271 IPR001220 GO:0030246
Amo13g4813 667 Gene3D Phosphorylase Kinase; domain 1 305 423 - -
Amo13g4813 667 SMART serkin_6 345 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4813 667 CDD lectin_legume_LecRK_Arcelin_ConA 21 260 IPR001220 GO:0030246
Amo13g4813 667 Gene3D Transferase(Phosphotransferase) domain 1 424 623 - -
Amo13g4813 667 SUPERFAMILY Protein kinase-like (PK-like) 320 619 IPR011009 -
Amo13g4813 667 Gene3D - 19 270 - -
Amo13g4813 667 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 7 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4813 Amo-Chr13 146389155 146391158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4813 26 632 Receptor kinase-like Gene Family AT2G37710 59.934 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g4813 PK_Tyr_Ser-Thr 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4813 - - adu:107484540 825.469