Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4781 ATGGAGCTTGCATCTGTGAAGAGTGAATTCAACCCAAGATGTAATAGGTTACACGTTATGGTGGATGGCAGCGAGGCTAATGCTTCTAAGGGCATCAAAAGGCGACGAAGAGATTCGTCTTTGCCTCTGCCTCTAACGGTGTTAGGGGGCAATGAACAACAAGGTGAACAGCCGGAAGCCCAACAGACACCACAGAGTGGCCAATCGACCCCCAGCACCGTGAAGAGAAGCTCAAGGTTCAGAGGAGTTAGCAGACACAGATGGACTGGAAGGTATGAAGCACATCTATGGGATAAAGGGACATGGAATCCAACTCAGAAAAAGAAAGGAAAGCAAGTGTATTTGGGAGCTTATAATGATGAAGAAGCTGCTGCTAGAGCTTATGATTTGGCTGCACTTAAGTATTGGGGAACATCAACGTTCACCAATTTTCCAGTATGTCAATAG 447 0.4631 MELASVKSEFNPRCNRLHVMVDGSEANASKGIKRRRRDSSLPLPLTVLGGNEQQGEQPEAQQTPQSGQSTPSTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGTSTFTNFPVCQ* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4781 148 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 147 - -
Amo13g4781 148 MobiDBLite consensus disorder prediction 46 78 - -
Amo13g4781 148 SMART rav1_2 79 148 IPR001471 GO:0003700|GO:0006355
Amo13g4781 148 MobiDBLite consensus disorder prediction 21 82 - -
Amo13g4781 148 ProSiteProfiles AP2/ERF domain profile. 79 145 IPR001471 GO:0003700|GO:0006355
Amo13g4781 148 Pfam AP2 domain 78 137 IPR001471 GO:0003700|GO:0006355
Amo13g4781 148 Gene3D AP2/ERF domain 78 147 IPR036955 GO:0003700|GO:0006355
Amo13g4781 148 SUPERFAMILY DNA-binding domain 78 146 IPR016177 GO:0003677
Amo13g4781 148 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4781 Amo-Chr13 145827999 145829735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4781 60 148 AP2-EREBP Transcription Factor Family AT5G17430 59.551 1.36e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Amo13g4781 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4781 - - adu:107481246 280.796