Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4774 ATGAAGAGATCATTGGTTTTGTTCTGTAACTTGTTTCCTGCAACAATCCTTCTTGTTCTGCTTACTATAACAAGAAGTACTTCTGCACAGCTTGTAAGCAGTGAGAACAGAATCCTCTTCCAAGTTCAGAAGCTTCTAGAATATCCACAAGCCCTTCAAGGATGGAATAACTGGACCAACTTCTGCTACCTCCCTCCATCACCTTCCCTCACCATAGTCTGCACAAATGGCCATGTCACAGAACTCACCATCATTGGAAACAACACTAGTTCTCATCAAATCCTTTCATCAAGGTTCTCCATTGATTCTCTCTTCACTGTGATGACAAAGTTTTCAAATTTGAAGGCCTTATCATTGGTTTCATTAGGTCTGTGGGGTCCATTACCTTCCAAGATCAACAGGTTCTGGTCACTGGAGGTTCTCAACATTAGTTCAAACTTCATTTATGGTGAAATTCCACCATCAATATCAACATTGAAGAGCCTCAAGAGTCTTGTTTTGGCTGATAATCTCTTCAATGGAACTGTCCCAGATTTCAAAAAGCTAACTTTTCTTCAAGAGCTTAACTTGGGTGGCAACAAGCTTGGTCCTTATTTTCCTTCACTATTAGGCCAGAATCTTGTGAGTCTTATCTTGAGGAACAATTCTCTGAGATCTCAAATTCCTCTTCAACTCATAAAATTTGATAAGCTTCAGACACTTGACATCTCTTCCAATGTAATCTTTGGAAAGATTCCATCTTTTCTTTTCTCTTTGCGTTCTCTCCAGTACCTAAACTTAGCTGCAAACCAATTAAGTGGTAACCTTTCGGCAAAAACAGCATGTGGTTCTGCACTGACATTTGTGGATATCTCACACAATCTTCTAGTTGGAAAGTTGCCATCATGCATTGGTTCAATGATTTCAAAGGGCAAGCTGCTATACTCTGGGAATTGTTTTTCAACAAGAAGGTTGAATGACCAGCAGCATCCATATTCATTTTGCAAGAAAGAGGTTGCCTTAGCCGTTAAGCCACCGGAGAAAACAAAGAAGGAGAACGAATCCAGAGTGAAACTAAGTCTATTACTTGGTATAATTGGAGGTGCTGTGGGAATTGCAGCAATTCTGGTTCTACTCACTGTGTTCATTGTGAGGAAATCCAACCAAGAAAGATCATATCGTCACCGCGACAGATCCGTTGCTGATAAATTTTATGCCCGAGCATCTCCCGGACCAAACACTGATACCAGACGTGTTCCTCAGACGATGAGGCTATCTGCGGTTGGAATGCCACCATACTGTAATTTCACATCAGAAGAAATTGAAGATGCAACAAACAACTTTGACTCAACAAATCTAATAGGAGAAGGAACACAGGGCCAACTATATAGAGGTTGGCTCAGAGATGGTGCAGTGGTCCTGGTTAACTGTGTAAAAATAAAGCAGAAGGGTTTGCCCCACACCATTAACCAGAACTTAGAGGTTTTGCCTAATTTGAGGCACAGGCATTTGATGAGTGTTCTAGGACACTGTGTCATTACTCATCAGGAAAATCCTCAACCAACAAGCACAGTCTTCATTGTCTTTGAACACATATCAAATGTGTCGCTTAGGGATCAACTTACAGATTGGAGAAAGAGAGATATGCTGAAATGGCCACAAAGAATGGCAATCAGCATAGGCATTGCAAGAGGGGTGCAGTTCTTGCACACAGGAGTTGCTCCTGGCATTTTCGGCAACAATTTGAAGGTTGAGAACATTCTATTGGATGATAGCCTCAATGCAAAAGTTAGTAGATACAGCATTCCATTGCCATCCAAGAACACTGACCAAAATGCCTCCAATCAGATTGGCAGCACAAATAATGCAGAAAAGGAAGATATCTATCAGTTGGGTGTTATTCTTCTTGAAGTTATCACTGGCAAACAAATTAAATCTTCCAGTGAAATAGAGGAGCTGAAGGATGAGCTGGAGAAAGGGTCATCAGAAGCACAGTCAGTACTAAGGAGTGCAGTTGATCCTTGCCTGAGGGGAACTTATGCATATGAATCAATGAGGACTGCAGTTCAGATCACCATCAATTGTCTCTCCAAGGCTGCTAGTCAGCGCCCTTCGATCGAGGATGTTCTGTGGAACTTGCAGTACTCGATGCAAGTTCAAGAGTCCTGGACCAGCAGTGGAAATCTCAGCACAAAGTTCTGA 2181 0.4177 MKRSLVLFCNLFPATILLVLLTITRSTSAQLVSSENRILFQVQKLLEYPQALQGWNNWTNFCYLPPSPSLTIVCTNGHVTELTIIGNNTSSHQILSSRFSIDSLFTVMTKFSNLKALSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPPSISTLKSLKSLVLADNLFNGTVPDFKKLTFLQELNLGGNKLGPYFPSLLGQNLVSLILRNNSLRSQIPLQLIKFDKLQTLDISSNVIFGKIPSFLFSLRSLQYLNLAANQLSGNLSAKTACGSALTFVDISHNLLVGKLPSCIGSMISKGKLLYSGNCFSTRRLNDQQHPYSFCKKEVALAVKPPEKTKKENESRVKLSLLLGIIGGAVGIAAILVLLTVFIVRKSNQERSYRHRDRSVADKFYARASPGPNTDTRRVPQTMRLSAVGMPPYCNFTSEEIEDATNNFDSTNLIGEGTQGQLYRGWLRDGAVVLVNCVKIKQKGLPHTINQNLEVLPNLRHRHLMSVLGHCVITHQENPQPTSTVFIVFEHISNVSLRDQLTDWRKRDMLKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKVENILLDDSLNAKVSRYSIPLPSKNTDQNASNQIGSTNNAEKEDIYQLGVILLEVITGKQIKSSSEIEELKDELEKGSSEAQSVLRSAVDPCLRGTYAYESMRTAVQITINCLSKAASQRPSIEDVLWNLQYSMQVQESWTSSGNLSTKF* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4774 726 SUPERFAMILY L domain-like 55 312 - -
Amo13g4774 726 Gene3D Transferase(Phosphotransferase) domain 1 525 721 - -
Amo13g4774 726 Pfam Protein kinase domain 443 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4774 726 Pfam Leucine Rich Repeat 230 249 IPR001611 GO:0005515
Amo13g4774 726 Pfam Leucine Rich Repeat 137 158 IPR001611 GO:0005515
Amo13g4774 726 PANTHER OS07G0166700 PROTEIN 6 719 IPR045272 GO:0004714|GO:0006468
Amo13g4774 726 Gene3D Phosphorylase Kinase; domain 1 406 511 - -
Amo13g4774 726 Gene3D Ribonuclease Inhibitor 32 323 IPR032675 -
Amo13g4774 726 ProSiteProfiles Protein kinase domain profile. 441 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4774 726 Coils Coil 643 663 - -
Amo13g4774 726 SUPERFAMILY Protein kinase-like (PK-like) 419 706 IPR011009 -
Amo13g4774 726 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 6 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4774 Amo-Chr13 145775836 145779558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4774 27 647 Miscellaneous Gene Families AT2G02780 50.619 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Amo13g4774 Pkinase 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4774 - - gmx:100789785 1050.04