Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4762 ATGATGAAGGGATTGGGTGGGATTGATTCTCAACCAGGTTCTTCTTTCTCGCGAACGAGTTCCAAGATGCACCAGCGACCCCCCTCTCAGACCATTCGACTCGGCCGGGTCCAGCCACAGGCACCTTCCTACCGCACCATTTTCTGCAATGATCGTGAATCCAATTTCCCCGTTCGCTTCAAGGGAAATTCAATATCTACTACAAAATACAACGTTTTAACCTTTTTACCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACCACACCAATTAGTCCCGTCTCTCCAATTACCAATGTACTTCCTCTATCCTTGGTTCTTCTTGCATCTCTTATTAAGGAAGCTTGGGAGGACTGGAAGCGCTTTCAAAATGACATGGCCATAAACAATAAAATGGTAGACGTTTTGCAAGATCAACGGTGGGTTTCTGTACCCTGGAAAGCGTTGCAGGTTGGAGACATTGTCAAGGTTAAGCAGGATGAATTCTTTCCAGCAGATCTGCTTTTCATGGCTAGTACAAATGCAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGARGGGGAAACCAACTTGAAGATAAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCACCGAAAGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCGCTGTATACCTTTACTGGAAATCTTATATTGGACAATCAAACATTGCCTCTCAGTCCAAATCAAGTTTTGCTGCGAGGATGCAGTCTCAGGAATACGGAGTATATTGTTACGGTGGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCAATGAACGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCACTCTATTTGTAACTCTCTTTGTGATGTGCTTTGTTGGAGCCACGGGCAGTGCACTCTTCGTAGACAAGAAATATTATTACTTACATCTTGATTCAATTGAGGAGGGATCATCACAGTTTAACCCTAACAACAGATTTTTGGTTCTTATTCTGACTATGTTTACCCTTATCACACTATACTCTTCAGTCATTCCCATTTCTCTTTATGTCTCTATAGAGATGATAAAATTTATCCAGTCTGCTCAGTTTATTAACAAGGACTTGCARATGTATCATAGTGAAACCAATACGCCTGCATTAGCTAGGACGTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTRTCTGACAAAACTGGGACTCTTACWAGAAACTTAATGGAYTTCTTCAAGTGRTCAATTGGTGGGGAGGTGTATGGACATGGTGTGACAGAAATTGAAAGGGGAATAGCAGAGCGCAATGGCATGAAAATTGAGGAAAAAAGATCACCCAATGCAGTGCAAGAGAAAGGTTTTAATTTTGATGATACTAGGATTATGAGAGGAGCATGGAGGAATGAGTCTAATCCTGATATCTGCAAGGGGTTCTTCAGATGTCTTGCTATATGTCATACAGTACTTCCTGAGGGTGAAGAGTCCCCTGAAAAGATTAAGTATCAAGCTGCGTCTCCTGATGAGTCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTCTTTTTCTACAGACGCACACCAACAGCTATATATGTTCGTGAATCTCATGTGGAGAAGATTGGCCATACTCAAGATGTATCCTATGAAATTTTAAATGTACTCGAGTTTAATAGTACAAGGAAGCGTCAGTCCGTTGTATGTCGTTATCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATACTGTAATCTTTGAGAGACTGGCTGATGGTAATAATGAAATCAGGAACTTGACAAGAGAGCATCTGGAACAATTTGGATCTGCTGGACTACGCACATTATGCCTGGCCTACAAAGAATTGCATCCTGATGCTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTTTACGTGATCGTGAGAAGAAGTTAGATGAGGTTGCGGAACTTATTGAAAATGGTCTCACTTTAATTGGTTGCACCGCCATCGAAGACAAGCTTCAGGAGGGAGTACCAGCTTGCATACGGACTCTTCAAAAGGCTGGTATCAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCAATAAACATAGCCTACGGTGAGTCTCTTGTTGGGTCAGCTGGTTTCTTGTGTCCTGTGTGCGCCCAAAAACTTTGTTCACTCTCATTTTATTAA 2277 0.4115 MMKGLGGIDSQPGSSFSRTSSKMHQRPPSQTIRLGRVQPQAPSYRTIFCNDRESNFPVRFKGNSISTTKYNVLTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLASLIKEAWEDWKRFQNDMAINNKMVDVLQDQRWVSVPWKALQVGDIVKVKQDEFFPADLLFMASTNADGVCYIETANLEGETNLKIRKALEKTWDYLTPPKASEFKGEIQCEQPNNSLYTFTGNLILDNQTLPLSPNQVLLRGCSLRNTEYIVTVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFVTLFVMCFVGATGSALFVDKKYYYLHLDSIEEGSSQFNPNNRFLVLILTMFTLITLYSSVIPISLYVSIEMIKFIQSAQFINKDLQMYHSETNTPALARTSNLNEELGQVEYILSDKTGTLTRNLMDFFKXSIGGEVYGHGVTEIERGIAERNGMKIEEKRSPNAVQEKGFNFDDTRIMRGAWRNESNPDICKGFFRCLAICHTVLPEGEESPEKIKYQAASPDESALVIAAKNFGFFFYRRTPTAIYVRESHVEKIGHTQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIFERLADGNNEIRNLTREHLEQFGSAGLRTLCLAYKELHPDAYESWNEKFIQAKSSLRDREKKLDEVAELIENGLTLIGCTAIEDKLQEGVPACIRTLQKAGIKIWVLTGDKIETAINIAYGESLVGSAGFLCPVCAQKLCSLSFY* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4762 758 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Amo13g4762 758 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 16 738 - -
Amo13g4762 758 CDD P-type_ATPase_APLT_Dnf-like 62 733 - -
Amo13g4762 758 Gene3D - 694 740 IPR023214 -
Amo13g4762 758 SUPERFAMILY Calcium ATPase, transduction domain A 142 286 IPR008250 -
Amo13g4762 758 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 16 738 - -
Amo13g4762 758 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 419 IPR023298 -
Amo13g4762 758 MobiDBLite consensus disorder prediction 10 36 - -
Amo13g4762 758 MobiDBLite consensus disorder prediction 1 36 - -
Amo13g4762 758 Pfam Phospholipid-translocating ATPase N-terminal 47 111 IPR032631 -
Amo13g4762 758 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 60 738 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo13g4762 758 Pfam E1-E2 ATPase 142 334 - -
Amo13g4762 758 Gene3D - 123 289 - -
Amo13g4762 758 SUPERFAMILY HAD-like 683 737 IPR036412 -
Amo13g4762 758 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 695 IPR023299 GO:0000166
Amo13g4762 758 Gene3D - 462 693 IPR023299 GO:0000166
Amo13g4762 758 Pfam Cation transport ATPase (P-type) 520 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4762 Amo-Chr13 145528867 145546261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4762 15 738 Primary Pumps ATPases AT1G59820 76.828 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4762 K14802 - gmx:100815547 1276.15