Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4758 ATGTCTAATAGTATGACAGAGAAGAAGAATAGTAACGGTGAGGTGAAGTTGTTGGGGGCATGGCCAAGCCCTTTTGTGATCAGAGCTCGCATAGCACTCAACATAAAATCAGTGGAATATGATTTTATTGAAGAGACTTTTGGGAAGAGAAGCCAGCTACTTCTAAAGTCCAACCCTGTCAACAAGCAAATCCCGGTTCTCATTCATGGTCACAAATGCATAGCTGAATCCATGATTATTGTTCAATATATCCATGAAGCTTGGTCCTCTTCAGGTCCTCCTATTCTTCCCTCTCTTCCTTATGATCGTGCCATCGCTAGATTTTGGCTTACTTATATTGATGATAAGTGGTTCCCGCCCTTGAAATCCATTGTGTTGGGACTAGACACAGAGCCCATAGAGGAAAAGTTGGAAAAAGTAAGAGAAGGGTTGGRATTGTTAGAGGATGCATTCAACAAAATAAGCAAAGGAAAAGATTTCTTTGGAGGTGACCAAATTGGGTACTTGGARATTGGGTTTGGAAGCTTCTTGGCATGGCTGAAGACGGTGGAGGTGACTGAAGGTGTGAYCTTGGTGCATGAAACCACCACTCCTGGCTTGGCTAAGTGGCTTCAAAAGTTTTGTGCACATGATGCTGTTAAGGATGTTCTGCCACCCATTGACAAGCTTATTGCCTTTTCTAAGATGCTAAGGGCCAATGTGGATCTTGTCATTAATCCTAATATGGTACTCATGCCTTTGTATGTATCTGAAACCATGGGTGAGGGTGAGGTGAAGGTGATTGGAAAATGGTCAAGCCCTTATGTTATGAGGGTGAAGATTGCCCTCAGAATCAAGTCCATTGAACATGAACACTTTGAAGAGACCTTGAACCCCAAGAGTGATCTTCTTCTCAAGTCTAATCCTGTGTATGCCAGGGTCCCTGTTCTAATTCACCATGGCAAACCCATCTCTGAGTCTCTCATCATAGTTGAATACATTGATGAGACTTGGTCCAATAATAATTCCCCTTCAATCCTTCCTTCTGATCCTTATGACAGAGCAATTGCTCGCTTTTGGGCCACTTATATAGATGAAAAGTGGTTTCCTTCCATGAAGAGCATTATAACTGTTGAAACAGAAGAAGAGAGGGAGCCATATTATAAGGTGATGGAAGAAGTGGTTGAGAGGGTGGAAGAGGCTTTTGGGAAGTGCAGCAAAGGGAAGCCCTTCTTTGGTGGGGATAGTGTTGGATTCCTTGACATTGCTTTTGGGAGCTTCTTAGGATGGCTCCATGTCACAGAATCTTTGTATGGAAGGAAGGTTCTTGTTGAGGCAAAGGCTCCTTCTTTGGTGAAATGGGCTGAGAGATTTGCTCATGATCCTGCTGTGAAGGGGCTTATTCCTGATCATGACAAGCTTCTTGAGATTTCCAAGCCTCTTCAGATCAAATGGAGAGCTTTAGCTGCTGTTGGCAAGAAATATTGA 1467 0.4308 MSNSMTEKKNSNGEVKLLGAWPSPFVIRARIALNIKSVEYDFIEETFGKRSQLLLKSNPVNKQIPVLIHGHKCIAESMIIVQYIHEAWSSSGPPILPSLPYDRAIARFWLTYIDDKWFPPLKSIVLGLDTEPIEEKLEKVREGLXLLEDAFNKISKGKDFFGGDQIGYLEIGFGSFLAWLKTVEVTEGVXLVHETTTPGLAKWLQKFCAHDAVKDVLPPIDKLIAFSKMLRANVDLVINPNMVLMPLYVSETMGEGEVKVIGKWSSPYVMRVKIALRIKSIEHEHFEETLNPKSDLLLKSNPVYARVPVLIHHGKPISESLIIVEYIDETWSNNNSPSILPSDPYDRAIARFWATYIDEKWFPSMKSIITVETEEEREPYYKVMEEVVERVEEAFGKCSKGKPFFGGDSVGFLDIAFGSFLGWLHVTESLYGRKVLVEAKAPSLVKWAERFAHDPAVKGLIPDHDKLLEISKPLQIKWRALAAVGKKY* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4758 488 Gene3D - 96 237 - -
Amo13g4758 488 Gene3D - 340 481 - -
Amo13g4758 488 CDD GST_C_Tau 344 472 IPR045074 GO:0004364|GO:0006749
Amo13g4758 488 SFLD Main.3: Omega- and Tau-like 254 478 IPR045073 -
Amo13g4758 488 SFLD Main.3: Omega- and Tau-like 12 234 IPR045073 -
Amo13g4758 488 Pfam Glutathione S-transferase, N-terminal domain 258 329 IPR004045 -
Amo13g4758 488 Pfam Glutathione S-transferase, N-terminal domain 14 85 IPR004045 -
Amo13g4758 488 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 92 IPR004045 -
Amo13g4758 488 SUPERFAMILY Thioredoxin-like 258 362 IPR036249 -
Amo13g4758 488 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 343 474 IPR010987 -
Amo13g4758 488 SUPERFAMILY Thioredoxin-like 15 118 IPR036249 -
Amo13g4758 488 CDD GST_C_Tau 100 228 IPR045074 GO:0004364|GO:0006749
Amo13g4758 488 PANTHER GLUTATHIONE S-TRANSFERASE U17 256 472 - -
Amo13g4758 488 SUPERFAMILY GST C-terminal domain-like 339 470 IPR036282 -
Amo13g4758 488 SFLD Glutathione Transferase (cytosolic) 12 234 IPR040079 -
Amo13g4758 488 SFLD Glutathione Transferase (cytosolic) 254 478 IPR040079 -
Amo13g4758 488 PANTHER GLUTATHIONE S-TRANSFERASE U17 13 228 - -
Amo13g4758 488 Pfam Glutathione S-transferase, C-terminal domain 352 455 IPR004046 -
Amo13g4758 488 Pfam Glutathione S-transferase, C-terminal domain 110 211 IPR004046 -
Amo13g4758 488 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 99 236 IPR010987 -
Amo13g4758 488 SUPERFAMILY GST C-terminal domain-like 86 232 IPR036282 -
Amo13g4758 488 CDD GST_N_Tau 15 88 - -
Amo13g4758 488 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 256 335 IPR004045 -
Amo13g4758 488 Gene3D Glutaredoxin 9 95 - -
Amo13g4758 488 Gene3D Glutaredoxin 252 339 - -
Amo13g4758 488 CDD GST_N_Tau 258 331 - -
Amo13g4758 488 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 228 IPR045073 -
Amo13g4758 488 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 256 472 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4758 Amo-Chr13 145484516 145502209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4758 253 472 Glutathione S-transferase Gene Family AT1G10370 57.273 7.52e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4758 K00799 - pxb:103950895 522.702