Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4738 ATGTCTAATAGTATGACAGAGAAGAAGAATAGTAATGGTGAGGTGAAGTTGTTGGGGGCATGGCCAAGCCCTTTTGTGATCAGAGCTCGCATAGCACTCAACATAAAATCAGTGGAATATGATTTTATTGAAGAGACTTTTGGGAAGAGAAGCCAGCTACTTCTAAAGTCCAACCCTGTCAACAAGCAAATCCCGGTTCTGATTCATGGTCACAAATGCATAGCTGAATCCATGATTATTGTTCAATATATCCATGAAGCTTGGTCCTCTTCAGGTCCTCCTATTCTTCCCTCTCTTCCTTATGATCGTGCCATCGCTAGATTTTGGCTTACTTATATTGATGATAAGTGGTTCCCGCCCTTGAAATCCATTGTGTTGGGACTAGACACAGAGCCCATAGAGGAAAAGTTGGAAAAAGTAAGAGAAGGGTTGGCATTGTTAGAGGATGCATTCAACAAAATAAGCAAAGGAAAAGATTTCTTTGGAGGTGACCAAATTGGGTACTTGGATATTGGGTTTGGAAGCTTCTTGGCATGGCTGAAGACGGTGGAGGTGACTGAAGGTGTGAACTTGGTGCATGAAACCACCACTCCTGGCTTGGCTAAGTGGCTTCAAAAGTTTTGTGCACATGATGCTGTTAAGGATGTTCTGCCACCCATTGACAAGCTTATTGCCTTTTCTAAGATGCTAAGGGCCAATGTGGATCTTGTCATTAATCCTAATATGGTACTCATGCGTTTGTATGTATCTGAAAATTCCAAAGAGGAGTATCCAACTTTGATTCTGATTTCTGCCATGGGTGAGAGTGAGGTGAAGGTGATTGGAAAATGGTCAAGCCCTTATGCTATGAGGGTGAAGATTGCCCTCAGAATCAAGTCCATTGAACATGAACACTTTGAAGAGACCTTGAACCCCAAGAGTGATCTTCTTCTCAAGTCTAATCCTGTGTATGCCAGGGTCCCTGTTCTAATCCACCATGGCAAACCCATCTCTGAGTCTCTCATCATAGTTGAATACATTGATGAGACTTGGTCCAATAATAACTCTCCTTCAATCCTTCCTTCTGATCCTTATGACAGAGCAATTGCTCGCTTTTGGGCCACTTATATAGATGAAAAGTGGTTTCCTTCCATGAAGAGCATTATAACTGTTGAAACAGAAGAAGAGAGGGAGCCATATTATAAGGTGATGGAAGAAGTGGTTGAGAGGGTGGAAGAGGCTTTTGGGAAGTGCAGCAAAGGGAAGCCCTTCTTTGGTGGGGATAGTGTTGGATTCCTTGACATTGCTTTTGGGAGCTTCTTAGGGTGGCTCCATGTCACAGAATCTTTGTATGGAAGGAAGGTTCTTGTTGAGGCAAAGGCTCCTTCTTTGGTGAAATGGGCTGAGAGATTTGCTGATGATCCTGCTGTGAAGGGGCTTATTCCTGATCATGACAAGCTTCTTGAGATTTCCAAGCCTCTTCAGATCAAATGGAGAGCTTTAGCTGCTGTTGGCAAGAAATATTGA 1506 0.4303 MSNSMTEKKNSNGEVKLLGAWPSPFVIRARIALNIKSVEYDFIEETFGKRSQLLLKSNPVNKQIPVLIHGHKCIAESMIIVQYIHEAWSSSGPPILPSLPYDRAIARFWLTYIDDKWFPPLKSIVLGLDTEPIEEKLEKVREGLALLEDAFNKISKGKDFFGGDQIGYLDIGFGSFLAWLKTVEVTEGVNLVHETTTPGLAKWLQKFCAHDAVKDVLPPIDKLIAFSKMLRANVDLVINPNMVLMRLYVSENSKEEYPTLILISAMGESEVKVIGKWSSPYAMRVKIALRIKSIEHEHFEETLNPKSDLLLKSNPVYARVPVLIHHGKPISESLIIVEYIDETWSNNNSPSILPSDPYDRAIARFWATYIDEKWFPSMKSIITVETEEEREPYYKVMEEVVERVEEAFGKCSKGKPFFGGDSVGFLDIAFGSFLGWLHVTESLYGRKVLVEAKAPSLVKWAERFADDPAVKGLIPDHDKLLEISKPLQIKWRALAAVGKKY* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4738 501 SUPERFAMILY GST C-terminal domain-like 352 483 IPR036282 -
Amo13g4738 501 SUPERFAMILY GST C-terminal domain-like 86 232 IPR036282 -
Amo13g4738 501 SFLD Main (cytGST) 12 234 - -
Amo13g4738 501 SFLD Main (cytGST) 267 491 - -
Amo13g4738 501 PANTHER GLUTATHIONE S-TRANSFERASE U17 13 228 - -
Amo13g4738 501 PANTHER GLUTATHIONE S-TRANSFERASE U17 269 485 - -
Amo13g4738 501 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 228 IPR045073 -
Amo13g4738 501 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 269 485 IPR045073 -
Amo13g4738 501 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 92 IPR004045 -
Amo13g4738 501 Gene3D Glutaredoxin 9 95 - -
Amo13g4738 501 Gene3D Glutaredoxin 265 352 - -
Amo13g4738 501 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 356 487 IPR010987 -
Amo13g4738 501 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 99 236 IPR010987 -
Amo13g4738 501 CDD GST_C_Tau 357 485 IPR045074 GO:0004364|GO:0006749
Amo13g4738 501 CDD GST_C_Tau 100 228 IPR045074 GO:0004364|GO:0006749
Amo13g4738 501 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 269 348 IPR004045 -
Amo13g4738 501 SUPERFAMILY Thioredoxin-like 271 375 IPR036249 -
Amo13g4738 501 Gene3D - 96 236 - -
Amo13g4738 501 Gene3D - 353 494 - -
Amo13g4738 501 CDD GST_N_Tau 271 344 - -
Amo13g4738 501 Pfam Glutathione S-transferase, C-terminal domain 110 211 IPR004046 -
Amo13g4738 501 Pfam Glutathione S-transferase, C-terminal domain 365 467 IPR004046 -
Amo13g4738 501 SUPERFAMILY Thioredoxin-like 15 118 IPR036249 -
Amo13g4738 501 CDD GST_N_Tau 15 88 - -
Amo13g4738 501 SFLD Main.3: Omega- and Tau-like 12 234 IPR045073 -
Amo13g4738 501 SFLD Main.3: Omega- and Tau-like 267 491 IPR045073 -
Amo13g4738 501 Pfam Glutathione S-transferase, N-terminal domain 15 85 IPR004045 -
Amo13g4738 501 Pfam Glutathione S-transferase, N-terminal domain 271 342 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4738 Amo-Chr13 145315659 145319432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4738 266 485 Glutathione S-transferase Gene Family AT1G10370 57.273 1.46e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4738 K00799 - phai:112873199 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4738 13 145315659 145319432 Amo13g4738 13 145315659 145319432 ECH