Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4735 ATGATGAAGGGATTGGGTGGGATTGATTCTCAACCAGGTTCTTCTTTCGCGCGAACGAGTTCCAAGATGCACCAGCGACCCCCCTCTCAGACCATTCGACTCGGCCGGGTCCAGCCACAGGCACCTTCCTACCGCACCATTTTCTGCAATGATCGTGAATCCAATTTCCCCGTTCGCTTCAAGGGAAATTCAATATCTACTACAAAATACAACGTTTTAACCTTTTTACCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACCACACCAATTAGTCCTGTCTCTCCAATTACCAATGTACTTCCTCTATCCTTGGTTCTTCTCGCATCTCTTATTAAGGAAGCTTGGGAGGACTGGAAGCGCTTTCAAAATGACATGGCCATAAACAATAAAATGGTAGATGTTTTGCAAGATCAACGGTGGGTTTCTGTACCCTGGAAAGCGTTGCAGGTTGGAGACATTGTCAAGGTTAAGCAGGATGAATTCTTTCCAGCAGATCTGCTTTTCATGGCTAGTACAAATGCAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGACGGGGAAACCAACTTGAAGATAAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCACCGAAAGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCGCTGTATACCTTTACTGGAAATCTTATATTGGACAATCAAACATTGCCTCTCAGTCCAAATCAAGTTTTGCTGCGAGGATGCAGTCTCAGGAATACGGAGTATATTGTTACGGTGGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCAATGAACGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCACTCTATTTGTAACTCTCTTTGTGATGTGCTTTGTTGGAGCCACGGGCAGTGCACTCTTCGTAGACAAGAAATATTATTACTTGCATCTTGATTCAATTGAGGAGGGATCATCACAGTTTAACCCTAACAACAGATTTTTGGTTCTTATTCTGACTATGTTTACCCTTATCACACTATACTCTTCAATCATTCCCATTTCTCTTTATGTCTCTATAGAGATGATAAAATTTATCCAGTCTGCTCAGTTTATTAACAAGGACTTGCATATGTATCATAGTGAAACCAATACGCCTGCATTAGCTAGGACGTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTTACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGTGGGGAGGTGTATGGACATGGTGTGACAGAAATTGAAAGGGGAATAGCAGAGCGCAATGGCATGAAAATTGAGGAAAAAAGATCACCCAATGCAGTGCAAGAGAAAGGTTTTAATTTTGATGATACTAGGATTATGAGAGGAGCATGGAGGAATGAGTCTAATCCTGATATCTGCAAGGGGTTCTTCAGATGTCTTGCTATATGTCATACAGTACTTCCTGAGGGTGAAGAGTCCCCTGAAAAGATTAAGTATCAAGCTGCGTCTCCTGATGAGTCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTCTTTTTTTACAGACGCACACCAACAGCTATATATGTTCGTGAATCTCATGTGGAGAAGATTGGCCATACTCAAGATGTATCCTATGAAATTTTAAATGTACTCGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATACTGTAATCTTTGAGAGACTGGCTGATGGTAATAATGAAATCAGGAACTTGACAAGAGAGCATCTGGAACAATTTGGATCTGCTGGACTACGCACATTATGCCTGGCCTACAAAGAATTGCATCCTGATGCTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTACGTGATCGTGAGAAGAAGTTAGATGAGGTTGCGGAACTTATTGAAAATGGTCTCACTTTAATTGGTTGCACCGCCATCGAAGACAAGCTTCAGGAGGGAGTACCAGCTTGCATACGGACTCTTCAAAAGGCTGGTATCAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCAATAAACATAGCCTACGCATGCAATTTAATAAACAATGAGATGAAGAAATTTATTATCAGCTCAGAAACTGATGCGATAAGAGAAGTTGAAGAAAAGGGTGACCAAGTGGAAATTGCACGATTTATTAAAGATGAAGTGAAAAAAGAGCTAAAGAAATGCACTGAGGAAGCACAGAGCTATTTTAACTCTGGATCTGCACCAAAATTAGCACTTGTAATTGATGGAAAGTGTCTAATGTATGCGTTGGATCCAAGTTTAAGAGTGATGCTGCTGGATTTAGGTTTGAACTGTCATGCTGTCGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTAACAAGTATGGTCAAGAAAGGTGCACATAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGTATAAGTGGGTTGGAAGGAATGCAAGCTGTGATGGCTAGTGACTTTGCCATTGCACAGTTCCGTTACTTGGAAGATTTGCTGCTTGTTCATGGCCGCTGGTCATATCTACGTGTATGCAAGGTGGTATTATACTTCTTCTACAAGAATCTCACATTCGCTCTCACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTCATCTTCACAGCAGTACCTGTGGTCATTGTTGGGCTATTTGACAAGGATGTCAGTGCGTCTTTATCCAAGAAGTATCCTGAGCTATACAAGGAGGGAATAAAGAATGCCTTCTTCAAGTGGAGAGTTGTGGCTGTCTATGCCTTTTTTTCTATATACCAGTCTCTAATATTCTTCTATTTTGTGGGCACAACAAACCTGACTGCTAAGAACTCAGATGGAAAGATATTTGGACTCTGGGATGTCAGTACAATGGCGTTCACATGTGTTGTAATAACTGTCAACTTGCGACTGCTTTTGATCTGTAATTCAATCACAAGATGGCACTATATTAGTGTCGGTGGAAGTATATTAGCCTGGTTTATTTTTGTTTTTATATACTCGTTGATTTGTCATCTTTTTGGTCGACAGAATGTTTATTTTGTCATCTTTGTCTTGATGAGTACATTCTATTTCTACTTCATACTACTACTTGTTCCCGTTGCTGCACTCTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTTTCAAATTGTTCAAGAAATGCACAAGAATGAGCTTAATGACACCGGTAGGGCAAAATTGCTGGAGGTAGAGAACCAGCTTACGGAAGATCAAGCAAGGAGCTACGCTGTATCTCGGCTCCCACCTGCAATATCAAAGCACACTGGGTTTGCATTCGATTCACCAGGGTACGAGTCATTCTTTGCTTCACAGATTGGTGTATATGCCCCTCCAAAGGCATGGGATGTTGCAAGACGAGCTAGCATGAAATCACGGCTAAAGATTGTGCTGCAAAAGTGA 3684 0.4074 MMKGLGGIDSQPGSSFARTSSKMHQRPPSQTIRLGRVQPQAPSYRTIFCNDRESNFPVRFKGNSISTTKYNVLTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLASLIKEAWEDWKRFQNDMAINNKMVDVLQDQRWVSVPWKALQVGDIVKVKQDEFFPADLLFMASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPPKASEFKGEIQCEQPNNSLYTFTGNLILDNQTLPLSPNQVLLRGCSLRNTEYIVTVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFVTLFVMCFVGATGSALFVDKKYYYLHLDSIEEGSSQFNPNNRFLVLILTMFTLITLYSSIIPISLYVSIEMIKFIQSAQFINKDLHMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGHGVTEIERGIAERNGMKIEEKRSPNAVQEKGFNFDDTRIMRGAWRNESNPDICKGFFRCLAICHTVLPEGEESPEKIKYQAASPDESALVIAAKNFGFFFYRRTPTAIYVRESHVEKIGHTQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIFERLADGNNEIRNLTREHLEQFGSAGLRTLCLAYKELHPDAYESWNEKFIQAKSSLRDREKKLDEVAELIENGLTLIGCTAIEDKLQEGVPACIRTLQKAGIKIWVLTGDKIETAINIAYACNLINNEMKKFIISSETDAIREVEEKGDQVEIARFIKDEVKKELKKCTEEAQSYFNSGSAPKLALVIDGKCLMYALDPSLRVMLLDLGLNCHAVVCCRVSPLQKAQVTSMVKKGAHKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLEDLLLVHGRWSYLRVCKVVLYFFYKNLTFALTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTAVPVVIVGLFDKDVSASLSKKYPELYKEGIKNAFFKWRVVAVYAFFSIYQSLIFFYFVGTTNLTAKNSDGKIFGLWDVSTMAFTCVVITVNLRLLLICNSITRWHYISVGGSILAWFIFVFIYSLICHLFGRQNVYFVIFVLMSTFYFYFILLLVPVAALFCDFVYQGVQRWFFPYDFQIVQEMHKNELNDTGRAKLLEVENQLTEDQARSYAVSRLPPAISKHTGFAFDSPGYESFFASQIGVYAPPKAWDVARRASMKSRLKIVLQK* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4735 1227 SUPERFAMILY Calcium ATPase, transduction domain A 142 286 IPR008250 -
Amo13g4735 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Amo13g4735 1227 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 16 1223 - -
Amo13g4735 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 695 IPR023299 GO:0000166
Amo13g4735 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1133 IPR032630 -
Amo13g4735 1227 SFLD Haloacid Dehalogenase 407 907 - -
Amo13g4735 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1133 IPR023298 -
Amo13g4735 1227 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Amo13g4735 1227 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Amo13g4735 1227 CDD P-type_ATPase_APLT_Dnf-like 62 1016 - -
Amo13g4735 1227 Gene3D - 553 689 IPR023299 GO:0000166
Amo13g4735 1227 MobiDBLite consensus disorder prediction 12 36 - -
Amo13g4735 1227 Pfam Phospholipid-translocating ATPase N-terminal 47 111 IPR032631 -
Amo13g4735 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 60 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo13g4735 1227 SUPERFAMILY HAD-like 413 898 IPR036412 -
Amo13g4735 1227 Coils Coil 771 791 - -
Amo13g4735 1227 Pfam E1-E2 ATPase 142 377 - -
Amo13g4735 1227 MobiDBLite consensus disorder prediction 1 36 - -
Amo13g4735 1227 Pfam Cation transport ATPase (P-type) 521 616 - -
Amo13g4735 1227 Gene3D - 690 896 IPR023214 -
Amo13g4735 1227 SFLD p-type atpase 407 907 IPR044492 -
Amo13g4735 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 829 935 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo13g4735 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 16 1223 - -
Amo13g4735 1227 Gene3D - 123 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4735 Amo-Chr13 145261810 145287347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4735 15 1223 Primary Pumps ATPases AT1G59820 77.044 0.0 1998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4735 K14802 - gmx:100815547 2148.63